RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TKTL1P51854 596 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 ART1P52961 327 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 OR1D5P58170 312 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 RPS8P62241 208 aaKnown RBP3.64□□□□□ -1.83
SNHG1-222ENST00000545308 GPR17Q13304 367 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 P2RY6Q15077 328 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 TAF13Q15543 124 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 PSRC1Q6PGN9 363 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-222ENST00000545308 MACC1Q6ZN28 852 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 FOXL2NBQ6ZUU3 175 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 TAF8Q7Z7C8 310 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 ISCA2Q86U28 154 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 NAGSQ8N159 534 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 OR7A2PQ8NGA2 310 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 OR4C15Q8NGM1 316 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 OR13A1Q8NGR1 328 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 RAET1EQ8TD07 263 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 UBTD2Q8WUN7 234 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 SEPT8Q92599 483 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 NXPE2Q96DL1 559 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 MED30Q96HR3 178 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 THOC3Q96J01 351 aaKnown RBP3.64□□□□□ -1.83
SNHG1-222ENST00000545308 CFAP53Q96M91 514 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 GUCD1Q96NT3 240 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 NEDD4LQ96PU5 975 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 TMEM204Q9BSN7 226 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 NACAP1Q9BZK3 213 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 CCSER1Q9C0I3 900 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 SIRPDQ9H106 197 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 PRO3102Q9H379 93 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 EGLN3Q9H6Z9 239 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 PANK3Q9H999 370 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 UPF2Q9HAU5 1272 aaKnown RBP3.64□□□□□ -1.83
SNHG1-222ENST00000545308 FAM212BQ9NTI7 297 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-222ENST00000545308 IL36AQ9UHA7 158 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 SLC12A6Q9UHW9 1150 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 TRMT112Q9UI30 125 aaKnown RBP3.64□□□□□ -1.83
SNHG1-222ENST00000545308 PILRBQ9UKJ0 227 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 PROCRQ9UNN8 238 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 AURKCQ9UQB9 309 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 NCKAP1Q9Y2A7 1128 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 ABCC4O15439 1325 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 UBE4BO95155 1302 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 SH3TC1Q8TE82 1336 aa3.64□□□□□ -1.83
SNHG1-222ENST00000545308 LAMB1P07942 1786 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 COL1A1P02452 1464 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 PLSCR5A0PG75 271 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SRRM4A7MD48 611 aaKnown RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 PRSS44E7EML9 344 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 NDC80O14777 642 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 LRP3O75074 770 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 GLRA3O75311 464 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ATP6V1G1O75348 118 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 GRAP2O75791 330 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 NGFP01138 241 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 MT-ND2P03891 347 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 GPIP06744 558 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 CETPP11597 493 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF18P17022 549 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 DNAJB1P25685 340 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 MARK3P27448 753 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ASMTP46597 345 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 DNA2P51530 1060 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SLC26A5P58743 744 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 KCNJ10P78508 379 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 GIT2Q14161 759 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 STX1AQ16623 288 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 WSCD2Q2TBF2 565 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 PDLIM3Q53GG5 364 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 HERC4Q5GLZ8 1057 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 WDR38Q5JTN6 314 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ABRAXAS1Q6UWZ7 409 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 C17orf107Q6ZR85 190 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SLC16A9Q7RTY1 509 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ADGRD2Q7Z7M1 963 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 NFE4Q86UQ8 179 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 KIRREL3Q8IZU9 778 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 TMEM99Q8N816 258 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SLC37A3Q8NCC5 494 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ZNF540Q8NDQ6 660 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 TRPV3Q8NET8 790 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 OR4C3Q8NH37 302 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 LMO3Q8TAP4 145 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SPATA18Q8TC71 538 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 NUDCD2Q8WVJ2 157 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 FCAMRQ8WWV6 532 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SYAP1Q96A49 352 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SENP5Q96HI0 755 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 SPAG8Q99932 426 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ZPBPQ9BS86 351 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 LRRC2Q9BYS8 371 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 EGLN1Q9GZT9 426 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 DPEP2Q9H4A9 486 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 CD93Q9NPY3 652 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 POLE3Q9NRF9 147 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 ECHDC1Q9NTX5 307 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 INTS9Q9NV88 658 aaKnown RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 PANK4Q9NVE7 773 aa3.63□□□□□ -1.83
SNHG1-222ENST00000545308 CGNQ9P2M7 1197 aaKnown RBP3.63□□□□□ -1.83
SNHG1-222ENST00000545308 FAM153AQ9UHL3 310 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms