RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 MSRB3Q8IXL7 192 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 SLC15A3Q8IY34 581 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 GOT1L1Q8NHS2 421 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-209ENST00000545305 UCN3Q969E3 161 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 PEX11GQ96HA9 241 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 ECSITQ9BQ95 431 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 CPPED1Q9BRF8 314 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-209ENST00000545305 YIPF2Q9BWQ6 316 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 CMTM6Q9NX76 183 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 SLC25A37Q9NYZ2 338 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 DHCR7Q9UBM7 475 aaKnown RBP12.99□□□□□ -0.33
SCARB1-209ENST00000545305 SLC7A8Q9UHI5 535 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 CES1P1Q9UKY3 287 aa12.99□□□□□ -0.33
SCARB1-209ENST00000545305 CROCCQ5TZA2 2017 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 MYO1GB0I1T2 1018 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 PROB1E7EW31 1015 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 CYR61O00622 381 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 CLDN4O14493 209 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 DNAJB6O75190 326 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 SCRG1O75711 98 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 CDK4P11802 303 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 HOXB9P17482 250 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 PTPN6P29350 595 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 MPIP34949 423 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 CHI3L1P36222 383 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 FEN1P39748 380 aaKnown RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 PDX1P52945 283 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 HBA1P69905 142 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 LIPEQ05469 1076 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 GAB1Q13480 694 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 DSG2Q14126 1118 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 TRIP6Q15654 476 aaKnown RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 RHBDD2Q6NTF9 364 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 FAM180BQ6P0A1 224 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 ZNF551Q7Z340 670 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 NET1Q7Z628 596 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 HPS6Q86YV9 775 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 ZNF595Q8IYB9 648 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 LRRC25Q8N386 305 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 DTWD1Q8N5C7 304 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 RNF148Q8N7C7 305 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 FAM13CQ8NE31 585 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 OR51Q1Q8NH59 317 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 COL26A1Q96A83 441 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 CNRIP1Q96F85 164 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 AMDHD1Q96NU7 426 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 CMKLR1Q99788 373 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 KCTD14Q9BQ13 255 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 SLC35A5Q9BS91 424 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 RAD21L1Q9H4I0 556 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 ALG2Q9H553 416 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 ZNF304Q9HCX3 659 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 SLAMF7Q9NQ25 335 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 SEMA3GQ9NS98 782 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 SLC6A13Q9NSD5 602 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 OCIAD1Q9NX40 245 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 SUCOQ9UBS9 1254 aaKnown RBP12.98□□□□□ -0.33
SCARB1-209ENST00000545305 BCAP29Q9UHQ4 241 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 PACSIN3Q9UKS6 424 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 NEUROG3Q9Y4Z2 214 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 PCDHB3Q9Y5E6 796 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 SNX8Q9Y5X2 465 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 MAU2Q9Y6X3 613 aa12.98□□□□□ -0.33
SCARB1-209ENST00000545305 WDFY4Q6ZS81 3184 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 VPS13AQ96RL7 3174 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 RNF103-CHMP3A0A140T963 221 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-209ENST00000545305 CLIC1O00299 241 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 POLR1CO15160 346 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-209ENST00000545305 HYAL3O43820 417 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-209ENST00000545305 KRT75O95678 551 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 GPR75O95800 540 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 C8orf89P0DMQ9 161 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 FGF5P12034 268 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 HSD17B1P14061 328 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 TCN1P20061 433 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-209ENST00000545305 IL10P22301 178 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 UQCRC2P22695 453 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 XCR1P46094 333 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 XKP51811 444 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 LIMK1P53667 647 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 INSM1Q01101 510 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-209ENST00000545305 MC2RQ01718 297 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 FOLH1Q04609 750 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 BNIP2Q12982 314 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 SELPLGQ14242 412 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 PRAMEF17Q5VTA0 474 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 C1orf189Q5VU69 101 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 ANGPTL8Q6UXH0 198 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 GLRX5Q86SX6 157 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 TNIP2Q8NFZ5 429 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 TBC1D20Q96BZ9 403 aa12.97□□□□□ -0.33
SCARB1-209ENST00000545305 FAM120BQ96EK7 910 aaKnown RBP12.97□□□□□ -0.33
SCARB1-209ENST00000545305 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-209ENST00000545305 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms