RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 C10orf62Q5T681 223 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 DEPDC1Q5TB30 811 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ABHD17BQ5VST6 288 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 KHDRBS2Q5VWX1 349 aaKnown RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 TTC19Q6DKK2 380 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 OR4C11Q6IEV9 310 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ADNP2Q6IQ32 1131 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 LINC00696Q6ZRV3 163 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 Q6ZS92 163 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 MILR1Q7Z6M3 343 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF595Q8IYB9 648 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 SHISA5Q8N114 240 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 SIRT6Q8N6T7 355 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 L3MBTL4Q8NA19 623 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 HUS1BQ8NHY5 278 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 PSMF1Q92530 271 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 HAS2Q92819 552 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 TSLPQ969D9 159 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 RGMAQ96B86 450 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 CNDP1Q96KN2 507 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF354BQ96LW1 612 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 MTERF1Q99551 399 aaKnown RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 SLC29A3Q9BZD2 475 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 EPB41L4BQ9H329 900 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 PIF1Q9H611 641 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 CLMPQ9H6B4 373 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ANKZF1Q9H8Y5 726 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 KCNK13Q9HB14 408 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ZBTB20Q9HC78 741 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 LYRM4Q9HD34 91 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 PRDM7Q9NQW5 492 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 PSD3Q9NYI0 1048 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 STMN3Q9NZ72 180 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ABI3Q9P2A4 366 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 PCTPQ9UKL6 214 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 DAPP1Q9UN19 280 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 VPS4AQ9UN37 437 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF462Q96JM2 2506 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 CPAMD8Q8IZJ3 1885 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 TCRBV16S1A1N1A0A5B0 115 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 A8MT66 165 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 PYCARD-AS1I3L0S3 204 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 GOLGA8RI6L899 631 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 FOXE1O00358 373 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CTNSO60931 367 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CDH16O75309 829 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 GLRA3O75311 464 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SH3BGRLO75368 114 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SUPT7LO94864 414 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 OTCP00480 354 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CELA2AP08217 269 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 RPS17P08708 135 aaKnown RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 MAOAP21397 527 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 HIST1H1TP22492 207 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CPN2P22792 545 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 ATP5A1P25705 553 aaKnown RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 TLX1P31314 330 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CCT5P48643 541 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CD97P48960 835 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SLC26A5P58743 744 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 RPS13P62277 151 aaKnown RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 HERVK_113P63132 956 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 RNF4P78317 190 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF33BQ06732 778 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 STX4Q12846 297 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 IFT88Q13099 833 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 BIKQ13323 160 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CUL3Q13618 768 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF169Q14929 603 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 RASA2Q15283 850 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 ZRSR2Q15696 482 aaKnown RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 IGFBP7Q16270 282 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 MEP1AQ16819 746 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 B3GNTL1Q67FW5 361 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 H3F3CQ6NXT2 135 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 LETMD1Q6P1Q0 360 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 BEND4Q6ZU67 534 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 UBE3DQ7Z6J8 389 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 TDRPQ86YL5 185 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SLC22A9Q8IVM8 553 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 TMEM132CQ8N3T6 1108 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SLC5A8Q8N695 610 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 ACOT4Q8N9L9 421 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 Q8NA96 180 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 MYRIPQ8NFW9 859 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 OR52B6Q8NGF0 335 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SUN3Q8TAQ9 357 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 WDR20Q8TBZ3 569 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 MIB2Q96AX9 1013 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 CCDC126Q96EE4 140 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 MEGF10Q96KG7 1140 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SERPINI1Q99574 410 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 C1QTNF3Q9BXJ4 246 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 ERVK-6Q9BXR3 956 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 RNF32Q9H0A6 362 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 OR51B5Q9H339 312 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 ZBTB26Q9HCK0 441 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 MMP25Q9NPA2 562 aa6.9□□□□□ -1.3
CPSF7-224ENST00000544990 SEMA4BQ9NPR2 832 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-224ENST00000544990 DMRT3Q9NQL9 472 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms