RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 UBTD1Q9HAC8 227 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 IL1RL2Q9HB29 575 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 MRPS30Q9NP92 439 aaKnown RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 HPF1Q9NWY4 346 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 TMEM160Q9NX00 188 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF226Q9NYT6 803 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 SPATA7Q9P0W8 599 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 STOX2Q9P2F5 926 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 FEZ2Q9UHY8 353 aaPredicted RBP3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ANAPC7Q9UJX3 599 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ADAM29Q9UKF5 820 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 MYO6Q9UM54 1294 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ERVK-11Q9UQG0 969 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 HEY1Q9Y5J3 304 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 CPAMD8Q8IZJ3 1885 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 ABCA4P78363 2273 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 HCFC1P51610 2035 aa3.77□□□□□ -1.81
SNHG1-220ENST00000544550 TRGV5A0A0B4J1U4 118 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 A0A1W2PPR1 153 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 FEZF1A0PJY2 475 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 LRRD1A4D1F6 860 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CCDC154A6NI56 674 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ARHGEF33A8MVX0 844 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 H7C0S8 307 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 KIF5CO60282 957 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ERN1O75460 977 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ITGA10O75578 1167 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ANXA9O76027 345 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 GLSO94925 669 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF888P0CJ79 500 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CYLC1P35663 651 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 GJC1P36383 396 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 PPARGP37231 505 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ARHGAP25P42331 645 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 MAGEA5P43359 124 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CPA2P48052 419 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 NR2C2P49116 596 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SSR4P51571 173 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CLCN2P51788 898 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 GEMP55040 296 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ATP5J2P56134 94 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SKP1P63208 163 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 EEF1A1P68104 462 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 MAT1AQ00266 395 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 RHAGQ02094 409 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 HSPA14Q0VDF9 509 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 TBL3Q12788 808 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 VEZF1Q14119 521 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 PTPRCAPQ14761 206 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 TMED2Q15363 201 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CLEC12BQ2HXU8 276 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 C3orf36Q3SXR2 165 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 HSP90AA4PQ58FG1 418 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ODF2Q5BJF6 829 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 EEF1A1P5Q5VTE0 462 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SLC9A4Q6AI14 798 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 NIPAL1Q6NVV3 410 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 PACS1Q6VY07 963 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 C12orf54Q6X4T0 127 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 PLEKHM3Q6ZWE6 761 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 MDGA2Q7Z553 956 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SLC26A11Q86WA9 606 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.76□□□□□ -1.813e-7■■■■■ 36.2
SNHG1-220ENST00000544550 KIF2BQ8N4N8 673 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CLDN19Q8N6F1 224 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 TMEM251Q8N6I4 163 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 PLD5Q8N7P1 536 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 LINC01356Q8N9X3 169 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 OR2A1Q8NGT9 310 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 OR9A4Q8NGU2 314 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CFAP61Q8NHU2 1237 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 TFB1MQ8WVM0 346 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SYN2Q92777 582 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ZBED6CLQ96FA7 236 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 TRMT61AQ96FX7 289 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 FOPNLQ96NB1 174 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ZFP3Q96NJ6 502 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 IL17FQ96PD4 163 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 PPP1R2P1Q96PQ5 205 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ALS2CR12Q96Q35 445 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 OR2A5Q96R48 311 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 PANX2Q96RD6 677 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 EBNA1BP2Q99848 306 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 CCDC77Q9BR77 488 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SYT11Q9BT88 431 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 DPH7Q9BTV6 452 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 RBM24Q9BX46 236 aaKnown RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 REG4Q9BYZ8 158 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 FAM129AQ9BZQ8 928 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 FAM96AQ9H5X1 160 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 BARX1Q9HBU1 254 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ANKHQ9HCJ1 492 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 ZNF701Q9NV72 531 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 QPCTLQ9NXS2 382 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 TAB2Q9NYJ8 693 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 SMARCAL1Q9NZC9 954 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 JKAMPQ9P055 326 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 KLHL8Q9P2G9 620 aaPredicted RBP3.76□□□□□ -1.81
SNHG1-220ENST00000544550 INTUQ9ULD6 942 aa3.76□□□□□ -1.81
SNHG1-220ENST00000544550 DRG1Q9Y295 367 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms