RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 METTL4Q8N3J2 472 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 OR52N2Q8NGI0 321 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 COL26A1Q96A83 441 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 RDH12Q96NR8 316 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 MKRN2Q9H000 416 aaKnown RBP15□□□□□ -0.01
SNRNP70-203ENST00000544278 DUSP21Q9H596 190 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 PALMDQ9NP74 551 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 MS4A12Q9NXJ0 267 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 SPHK1Q9NYA1 384 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 MARK1Q9P0L2 795 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 IL20RAQ9UHF4 553 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 ANHXE9PGG2 379 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 WWP2O00308 870 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 SRPRAP08240 638 aaKnown RBP15□□□□□ -0.01
SNRNP70-203ENST00000544278 SLC35G4P0C7Q5 338 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 TGM4P49221 684 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 DUSP2Q05923 314 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 ELP6Q0PNE2 266 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 CCDC116Q8IYX3 515 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 CCL4L1Q8NHW4 92 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 PSMA8Q8TAA3 256 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 GGHQ92820 318 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 TM4SF18Q96CE8 201 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 RNF31Q96EP0 1072 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 SH3YL1Q96HL8 342 aaPredicted RBP15□□□□□ -0.01
SNRNP70-203ENST00000544278 Q96MT0 163 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 TEFMQ96QE5 360 aaKnown RBP15□□□□□ -0.01
SNRNP70-203ENST00000544278 NLNQ9BYT8 704 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 CAPN10Q9HC96 672 aa15□□□□□ -0.01
SNRNP70-203ENST00000544278 PLXNA2O75051 1894 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 PGRMC2O15173 223 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 SLC28A2O43868 658 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 PRMT3O60678 531 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 EFCAB14O75071 495 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 CCDC159P0C7I6 412 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 BMP4P12644 408 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 DDX6P26196 483 aaKnown RBP eCLIP14.99□□□□□ -0.011e-8■■□□□ 14.4
SNRNP70-203ENST00000544278 CNR2P34972 360 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 SSR2P43308 183 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ST13P50502 369 aaKnown RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 SLC13A2Q13183 592 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 MLF2Q15773 248 aaPredicted RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 INAQ16352 499 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 RFX4Q33E94 735 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 COLEC12Q5KU26 742 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 PIP5KL1Q5T9C9 394 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 C1orf53Q5VUE5 145 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 CHPT1Q8WUD6 406 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 LHX9Q9NQ69 397 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ACER3Q9NUN7 267 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ZNF226Q9NYT6 803 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 KCNE3Q9Y6H6 103 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 TDRD6O60522 2096 aaKnown RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 MDC1Q14676 2089 aaKnown RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 QSOX1O00391 747 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 PI15O43692 258 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 OR10H3O60404 316 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ITIH1P19827 911 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 S100A1P23297 94 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ID2Q02363 134 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 MLLT1Q03111 559 aaPredicted RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ST3GAL4Q11206 333 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 VEZF1Q14119 521 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 PAQR6Q6TCH4 344 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 C6orf120Q7Z4R8 191 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 LRRTM4Q86VH4 590 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 TSPYL5Q86VY4 417 aaPredicted RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 OR4N5Q8IXE1 308 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 STX19Q8N4C7 294 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 GPR32P1Q8NGA4 272 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 OR52E4Q8NGH9 312 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 DNAJB8Q8NHS0 232 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 SMARCD2Q92925 531 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ZG16BQ96DA0 208 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 LGALS12Q96DT0 336 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 C16orf58Q96GQ5 468 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ZNF717Q9BY31 904 aaPredicted RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 AICDAQ9GZX7 198 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 SERHL2Q9H4I8 314 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 C6orf106Q9H6K1 298 aaPredicted RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 EXOSC4Q9NPD3 245 aaKnown RBP14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 ABCB10Q9NRK6 738 aa14.99□□□□□ -0.01
SNRNP70-203ENST00000544278 PRAMEF27A3QJZ7 478 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 NFATC1O95644 943 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 GDI1P31150 447 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 LASP1Q14847 261 aaKnown RBP14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 PTGES3Q15185 160 aaKnown RBP14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 IRF4Q15306 451 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 MOGQ16653 247 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 KHDRBS2Q5VWX1 349 aaKnown RBP14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 FAHD1Q6P587 224 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 TRIM40Q6P9F5 258 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 DHRS4L2Q6PKH6 230 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 SDR16C5Q8N3Y7 309 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 CHCHD4Q8N4Q1 142 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 FBXL6Q8N531 539 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 FGF14Q92915 247 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 ALPK1Q96QP1 1244 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 TUBA1CQ9BQE3 449 aa14.98□□□□□ -0.01
SNRNP70-203ENST00000544278 MVB12BQ9H7P6 319 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms