RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 UGT2A3Q6UWM9 527 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 UBQLNLQ8IYU4 475 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 OR2T33Q8NG76 320 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 CPT1CQ8TCG5 803 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 KCNH6Q9H252 994 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 ASF1BQ9NVP2 202 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 HCRTR2O43614 444 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 DUSP11O75319 330 aaKnown RBP14.84□□□□□ -0.03
CHD4-210ENST00000544040 EOMESO95936 686 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 NR2C1P13056 603 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 HLA-EP13747 358 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 SHFQ7M4L6 423 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 KIAA1191Q96A73 305 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 DMAC2Q9NW81 257 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 VSTM5A8MXK1 200 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 NPIPA2E9PIF3 369 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 NPIPA3F8WFD2 350 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 IFNA1P01562 189 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 SLC27A4Q6P1M0 643 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 DPY19L4Q7Z388 723 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 DBF4BQ8NFT6 615 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 CHD1O14646 1710 aa14.84□□□□□ -0.03
CHD4-210ENST00000544040 SLC16A8O95907 504 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 ADH6P28332 368 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 BRAT1Q6PJG6 821 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 ACTL8Q9H568 366 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 ABCA9Q8IUA7 1624 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 KIF20BQ96Q89 1820 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 KLF11O14901 512 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 CMTM8Q8IZV2 173 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 CMASQ8NFW8 434 aaPredicted RBP14.83□□□□□ -0.03
CHD4-210ENST00000544040 PIP5K1AQ99755 562 aa14.83□□□□□ -0.03
CHD4-210ENST00000544040 MRPS17Q9Y2R5 130 aaKnown RBP14.83□□□□□ -0.03
CHD4-210ENST00000544040 SNHG28P0DPA3 235 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 PTPN6P29350 595 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 STC1P52823 247 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 PGGT1BP53609 377 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 RPS26P62854 115 aaKnown RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 C6orf141Q5SZD1 244 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 TMEM126BQ8IUX1 230 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 C2CD4AQ8NCU7 369 aaPredicted RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 SULT4A1Q9BR01 284 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 HINT2Q9BX68 163 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 ABCG5Q9H222 651 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 ACSL6Q9UKU0 697 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 WNT6Q9Y6F9 365 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 FGF3P11487 239 aaPredicted RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 PYCR1P32322 319 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 NRIP1P48552 1158 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 VSX2P58304 361 aaPredicted RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 HS3ST5Q8IZT8 346 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 LIN37Q96GY3 246 aaPredicted RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 MROQ9BYG7 248 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 SLC7A11Q9UPY5 501 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 YIPF1Q9Y548 306 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 CD34P28906 385 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 DYRK1AQ13627 763 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 CLCA4Q14CN2 919 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 ZNF674Q2M3X9 581 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 PPP2R2DQ66LE6 453 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 TMEM107Q6UX40 140 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 LGALS12Q96DT0 336 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 HSD3B7Q9H2F3 369 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 TUBG2Q9NRH3 451 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 TARBP1Q13395 1621 aaKnown RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 PRKCAP17252 672 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 AQP2P41181 271 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 GPR4P46093 362 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 GPRC6AQ5T6X5 926 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 PDZD9Q8IXQ8 264 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 MMABQ96EY8 250 aaPredicted RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 MYNNQ9NPC7 610 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 UBE2J1Q9Y385 318 aaPredicted RBP14.83□□□□□ -0.04
CHD4-210ENST00000544040 PCDHB3Q9Y5E6 796 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 PCDHGA6Q9Y5G7 932 aa14.83□□□□□ -0.04
CHD4-210ENST00000544040 CREBL2O60519 120 aaPredicted RBP14.82□□□□□ -0.04
CHD4-210ENST00000544040 FADDQ13158 208 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 SNTB2Q13425 540 aaKnown RBP14.82□□□□□ -0.04
CHD4-210ENST00000544040 PPA1Q15181 289 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 SSX2Q16385 188 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 ITFG2Q969R8 447 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 ALDH3B1P43353 468 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 GHRHRQ02643 423 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 TMEM164Q5U3C3 297 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 PLEKHG7Q6ZR37 379 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 PGAM5Q96HS1 289 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 FAM124BQ9H5Z6 455 aaPredicted RBP14.82□□□□□ -0.04
CHD4-210ENST00000544040 PTGES2Q9H7Z7 377 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 PLEKHA3Q9HB20 300 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 GPR83Q9NYM4 423 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 STUB1Q9UNE7 303 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 ARPC4-TTLL3A0A0A6YYG9 625 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 USP2O75604 605 aaPredicted RBP14.82□□□□□ -0.04
CHD4-210ENST00000544040 SNAPC5O75971 98 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 LCKP06239 509 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 OR8U9P0C7N5 309 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 PTH2RP49190 550 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 POU3F4P49335 361 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 NOGQ13253 232 aa14.82□□□□□ -0.04
CHD4-210ENST00000544040 GSG1LQ6UXU4 331 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms