RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 TREX1Q9NSU2 369 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 TDP1Q9NUW8 608 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 TAS2R16Q9NYV7 291 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 MED31Q9Y3C7 131 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 PCDHGA3Q9Y5H0 932 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 ASXL3Q9C0F0 2248 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 CACNA1IQ9P0X4 2223 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 A0A1W2PRG6 482 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 BLOC1S5-TXNDC5H3BN57 136 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 PROM1O43490 865 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 AKAP8O43823 692 aaKnown RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 PRMT3O60678 531 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 REM1O75628 298 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 GSTT2P0CG29 244 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 GSTT2BP0CG30 244 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 DRD5P21918 477 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 DNAJB1P25685 340 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 DDX6P26196 483 aaKnown RBP eCLIP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 CMPK1P30085 196 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 NAA10P41227 235 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 CTSOP43234 321 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 MAGEA3P43357 314 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 PUDPQ08623 228 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 CBLBQ13191 982 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 LEXMQ3ZCV2 418 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 LRRC37A5PQ49AS3 106 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 ADNP2Q6IQ32 1131 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 PLEKHG7Q6ZR37 379 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 SRFBP1Q8NEF9 429 aaKnown RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 CIDECQ96AQ7 238 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 GRXCR1A8MXD5 290 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 XKRYO14609 159 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 ACOT8O14734 319 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 ACRV1P26436 265 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 GRPRP30550 384 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 RAB15P59190 212 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 WDR53Q7Z5U6 358 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 RANBP3LQ86VV4 465 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 Q8N402 240 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 ASCC1Q8N9N2 400 aaKnown RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 DNAJB8Q8NHS0 232 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 RGMAQ96B86 450 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 MCHR1Q99705 422 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 P2RY13Q9BPV8 354 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 C11orf84Q9BUA3 381 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 CENPMQ9NSP4 180 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 IL17CQ9P0M4 197 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 SARDHQ9UL12 918 aa12.39□□□□□ -0.43
TUBGCP2-210ENST00000543663 M0R3H8 397 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 EEF1E1O43324 174 aaKnown RBP12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 B4GALT2O60909 372 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 PRAMEF12O95522 483 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 NPPAP01160 153 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TYRP1P17643 537 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 AKT2P31751 481 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 PYCR1P32322 319 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 PPP5CP53041 499 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TBPL1P62380 186 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 FBXO43Q4G163 708 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 C4orf46Q504U0 113 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TBPL2Q6SJ96 375 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TMEM25Q86YD3 366 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 CHDHQ8NE62 594 aaPredicted RBP12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 GRPEL2Q8TAA5 225 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 PCNPQ8WW12 178 aaKnown RBP12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZSWIM3Q96MP5 696 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 MAPKAP1Q9BPZ7 522 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 CDADC1Q9BWV3 514 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 B3GNT4Q9C0J1 378 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TBCCD1Q9NVR7 557 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 FBXL3Q9UKT7 428 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 RWDD3Q9Y3V2 267 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 OARD1Q9Y530 152 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 PCDHB11Q9Y5F2 797 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 PRSS21Q9Y6M0 314 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 NPIPB15A6NHN6 443 aaPredicted RBP12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 PSMA3P25788 255 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 GPR4P46093 362 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 VEGFBP49765 207 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 SEMA3BQ13214 749 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 KCTD11Q693B1 232 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TUBA3EQ6PEY2 450 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 B3GLCTQ6Y288 498 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 KLBQ86Z14 1044 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZNF431Q8TF32 576 aaPredicted RBP12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 ZSCAN5AQ9BUG6 496 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 MND1Q9BWT6 205 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 IL36AQ9UHA7 158 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 WDR45Q9Y484 360 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 TTC34A8MYJ7 566 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 LEFTY2O00292 366 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 KHNYNO15037 678 aaKnown RBP12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 B3GALT4O96024 378 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 FGF4P08620 206 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 SDC1P18827 310 aa12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 RPL34P49207 117 aaKnown RBP12.38□□□□□ -0.43
TUBGCP2-210ENST00000543663 VLDLRP98155 873 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms