RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 MEIS3P2A8K0S8 358 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 IQCF3P0C7M6 154 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 HSD17B2P37059 387 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 SCGB2B2Q4G0G5 96 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 SUSD1Q6UWL2 747 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 GALNT13Q8IUC8 556 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 PROKR1Q8TCW9 393 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 TRIM43Q96BQ3 446 aaPredicted RBP18.56■□□□□ 0.56
SUDS3-204ENST00000543473 MRPS30Q9NP92 439 aaKnown RBP18.56■□□□□ 0.56
SUDS3-204ENST00000543473 ADAP00813 363 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 PRH1P02810 166 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 ITGAMP11215 1152 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 GKP32189 559 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 SMN1Q16637 294 aaKnown RBP18.56■□□□□ 0.56
SUDS3-204ENST00000543473 MSANTD1Q6ZTZ1 278 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 OR4K3Q96R72 315 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 TM9SF2Q99805 663 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 PAAF1Q9BRP4 392 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 TCRBV5S1A1TA0A578 114 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 HMX2A2RU54 273 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 LAMP1P11279 417 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 HSD3B1P14060 373 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 HSD3B2P26439 372 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 MEF2AQ02078 507 aaPredicted RBP18.56■□□□□ 0.56
SUDS3-204ENST00000543473 BRAT1Q6PJG6 821 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 OR5J2Q8NH18 312 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 SHKBP1Q8TBC3 707 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 C5orf34Q96MH7 638 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 NANSQ9NR45 359 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 TAS2R3Q9NYW6 316 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 GPRC5BQ9NZH0 403 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 ERVW-1Q9UQF0 538 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 AGR2O95994 175 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 CAPNS1P04632 268 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 GALTP07902 379 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 GIMD1P0DJR0 217 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 POLR2IP36954 125 aaKnown RBP18.56■□□□□ 0.56
SUDS3-204ENST00000543473 PSMD8P48556 350 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 RGS6P49758 472 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 MC1RQ01726 317 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 SEC23BQ15437 767 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 CEACAM19Q7Z692 300 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 ACSL6Q9UKU0 697 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 NOP16Q9Y3C1 178 aaKnown RBP18.56■□□□□ 0.56
SUDS3-204ENST00000543473 SLX4Q8IY92 1834 aa18.56■□□□□ 0.56
SUDS3-204ENST00000543473 CLDN24A6NM45 220 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 MAP3K8P41279 467 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 HK3P52790 923 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 CAP1Q01518 475 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 BCL2L15Q5TBC7 163 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 Q6ZVU0 165 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 OR9Q2Q8NGE9 314 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 NR4A3Q92570 626 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 MCHR1Q99705 422 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 MRTO4Q9UKD2 239 aaKnown RBP18.55■□□□□ 0.56
SUDS3-204ENST00000543473 LDB2O43679 373 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 ARSIQ5FYB1 569 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 EIF5AL1Q6IS14 154 aaKnown RBP18.55■□□□□ 0.56
SUDS3-204ENST00000543473 ARL6Q9H0F7 186 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 GNG8Q9UK08 70 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 CTDSP2O14595 271 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 CDK1P06493 297 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 CASP3P42574 277 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 TUBB3Q13509 450 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 DOC2AQ14183 400 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 HAGHLQ6PII5 290 aaPredicted RBP18.55■□□□□ 0.56
SUDS3-204ENST00000543473 KDELC1Q6UW63 502 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 ACOT12Q8WYK0 555 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 AHCYL2Q96HN2 611 aaKnown RBP18.55■□□□□ 0.56
SUDS3-204ENST00000543473 LMLNQ96KR4 655 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 B3GNT4Q9C0J1 378 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 ENPP4Q9Y6X5 453 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 LAMA4Q16363 1823 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 RASGRP1O95267 797 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 VAMP1P23763 118 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 ACRV1P26436 265 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 GGT2P36268 569 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 LRRN1Q6UXK5 716 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 KLBQ86Z14 1044 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 OR56A1Q8NGH5 318 aa18.55■□□□□ 0.56
SUDS3-204ENST00000543473 FBXO9Q9UK97 447 aaPredicted RBP18.55■□□□□ 0.56
SUDS3-204ENST00000543473 A0A1W2PQ09 198 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 JRKO75564 520 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 POP7O75817 140 aaKnown RBP18.54■□□□□ 0.56
SUDS3-204ENST00000543473 PTNP21246 168 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 ACADLP28330 430 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 GPM6BQ13491 265 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 PLAG1Q6DJT9 500 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 PLCZ1Q86YW0 608 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 GID4Q8IVV7 300 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 PXYLP1Q8TE99 480 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 ZNF471Q9BX82 626 aaPredicted RBP18.54■□□□□ 0.56
SUDS3-204ENST00000543473 MGAT4CQ9UBM8 478 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 B4GALT6Q9UBX8 382 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 USP22Q9UPT9 525 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 PCDHA9Q9Y5H5 950 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 SMAD9O15198 467 aaKnown RBP18.54■□□□□ 0.56
SUDS3-204ENST00000543473 GMFGO60234 142 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 GABRB3P28472 473 aa18.54■□□□□ 0.56
SUDS3-204ENST00000543473 TNFSF8P32971 234 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms