RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 CDKL2Q92772 493 aa14.35□□□□□ -0.11
CD4-210ENST00000541982 ARSGQ96EG1 525 aa14.35□□□□□ -0.11
CD4-210ENST00000541982 TSPAN17Q96FV3 270 aa14.35□□□□□ -0.11
CD4-210ENST00000541982 SH3GL2Q99962 352 aa14.35□□□□□ -0.11
CD4-210ENST00000541982 CNPPD1Q9BV87 410 aa14.35□□□□□ -0.11
CD4-210ENST00000541982 CNOT10Q9H9A5 744 aaKnown RBP14.35□□□□□ -0.11
CD4-210ENST00000541982 SMYD2Q9NRG4 433 aa14.35□□□□□ -0.11
CD4-210ENST00000541982 BEX4Q9NWD9 120 aaPredicted RBP14.35□□□□□ -0.11
CD4-210ENST00000541982 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.35□□□□□ -0.11
CD4-210ENST00000541982 ANKDD1BA6NHY2 528 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 EIF3HO15372 352 aaKnown RBP eCLIP14.34□□□□□ -0.11
CD4-210ENST00000541982 TAPBPO15533 448 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 ERI3O43414 337 aaKnown RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 B3GALT2O43825 422 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 CELA3AP09093 270 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 TACR1P25103 407 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 PPP2R1BP30154 601 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 HNRNPH1P31943 449 aaKnown RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 DNASE1L1P49184 302 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 ATP6V0D1P61421 351 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 C18orf21Q32NC0 220 aaPredicted RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 CHSY3Q70JA7 882 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 MAATS1Q7Z4T9 603 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 RELL2Q8NC24 303 aaPredicted RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 OR2L5Q8NG80 312 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 OR14A16Q8NHC5 309 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 CCT6BQ92526 530 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 QRFPRQ96P65 431 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 KRT12Q99456 494 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 ZNF395Q9H8N7 513 aaPredicted RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 DNAJC11Q9NVH1 559 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 TUBA8Q9NY65 449 aaPredicted RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 WWOXQ9NZC7 414 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 ZNF629Q9UEG4 869 aaPredicted RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 MTO1Q9Y2Z2 717 aaKnown RBP14.34□□□□□ -0.11
CD4-210ENST00000541982 ATG4BQ9Y4P1 393 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 CLDN16Q9Y5I7 305 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 JMJD1CQ15652 2540 aa14.34□□□□□ -0.11
CD4-210ENST00000541982 FAM187AA6NFU0 413 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 NCF1BA6NI72 391 aaPredicted RBP14.33□□□□□ -0.12
CD4-210ENST00000541982 NCF1CA8MVU1 366 aaPredicted RBP14.33□□□□□ -0.12
CD4-210ENST00000541982 CLGNO14967 610 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 ARHGEF9O43307 516 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 STK16O75716 305 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 TBX6O95947 436 aaPredicted RBP14.33□□□□□ -0.12
CD4-210ENST00000541982 CCDC166P0CW27 439 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 NCF1P14598 390 aaPredicted RBP14.33□□□□□ -0.12
CD4-210ENST00000541982 SSTR1P30872 391 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 DCAF7P61962 342 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 NKX6-1P78426 367 aaPredicted RBP14.33□□□□□ -0.12
CD4-210ENST00000541982 CALCOCO2Q13137 446 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 SF3B4Q15427 424 aaKnown RBP eCLIP14.33□□□□□ -0.12
CD4-210ENST00000541982 SULT1C3Q6IMI6 304 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 TRIM40Q6P9F5 258 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 GPSM1Q86YR5 675 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 ULK2Q8IYT8 1036 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 LIX1Q8N485 282 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 WDR34Q96EX3 536 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 SERINC2Q96SA4 455 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 GPR22Q99680 433 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 RBBP8Q99708 897 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 CPNE1Q99829 537 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 ERP44Q9BS26 406 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 TMEM79Q9BSE2 394 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 REXO4Q9GZR2 422 aaKnown RBP14.33□□□□□ -0.12
CD4-210ENST00000541982 PLEKHF2Q9H8W4 249 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 QPCTLQ9NXS2 382 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 WHRNQ9P202 907 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 TXNDC16Q9P2K2 825 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 SPRR3Q9UBC9 169 aa14.33□□□□□ -0.12
CD4-210ENST00000541982 BOKQ9UMX3 212 aaPredicted RBP14.33□□□□□ -0.12
CD4-210ENST00000541982 FN1P02751 2386 aaKnown RBP14.32□□□□□ -0.12
CD4-210ENST00000541982 RTTNQ86VV8 2226 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 A0A0G2JN53 185 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 CXorf49A8MYA2 514 aaPredicted RBP14.32□□□□□ -0.12
CD4-210ENST00000541982 AHRRA9YTQ3 701 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 TGFBR3LH3BV60 316 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 CTNSO60931 367 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 IL2RAP01589 272 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 GSTA2P09210 222 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 CCL3P10147 92 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 CD1DP15813 335 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 STMN1P16949 149 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 ENDOUP21128 410 aaKnown RBP14.32□□□□□ -0.12
CD4-210ENST00000541982 CEACAM8P31997 349 aaPredicted RBP14.32□□□□□ -0.12
CD4-210ENST00000541982 TIMP3P35625 211 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 GP5P40197 560 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 MTTPP55157 894 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 RNF4P78317 190 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 TGM3Q08188 693 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 LAPTM5Q13571 262 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 EFTUD2Q15029 972 aaKnown RBP eCLIP14.32□□□□□ -0.12
CD4-210ENST00000541982 PCBP2Q15366 365 aaKnown RBP eCLIP14.32□□□□□ -0.12
CD4-210ENST00000541982 SLC22A10Q63ZE4 541 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 ABHD17CQ6PCB6 329 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 CAPN12Q6ZSI9 719 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 VN1R5Q7Z5H4 357 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 PDPRQ8NCN5 879 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 C7orf57Q8NEG2 295 aa14.32□□□□□ -0.12
CD4-210ENST00000541982 PTCD3Q96EY7 689 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms