RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 PATE3B3GLJ2 98 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 C9JVG2 144 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ALOX12BO75342 701 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ZNF20P17024 532 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 GSTM2P28161 218 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 MNX1P50219 401 aaPredicted RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 PPP3R1P63098 170 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ERVK-8P63133 956 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 SIRPAP78324 504 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 DNASE1L3Q13609 305 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 KCNAB1Q14722 419 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 LRIF1Q5T3J3 769 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 GUSBP11Q6P575 273 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 PEG10Q86TG7 708 aaKnown RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 OR6K6Q8NGW6 343 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 FUBP1Q96AE4 644 aaKnown RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ERVK-19Q9WJR5 959 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 A8MT66 165 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 C11orf98E9PRG8 122 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 EIF1AYO14602 144 aaKnown RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 CLOCKO15516 846 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 STK17BO94768 372 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 FABP3P05413 133 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 TRA2AQ13595 282 aaKnown RBP eCLIP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 NEDD8Q15843 81 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 IQCCQ4KMZ1 466 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 PAPD4Q6PIY7 484 aaKnown RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 FRRS1Q6ZNA5 592 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 OR52J3Q8NH60 311 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 C9orf43Q8TAL5 461 aaPredicted RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 OR5B2Q96R09 309 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 SERHL2Q9H4I8 314 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 REEP4Q9H6H4 257 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 SERHLQ9NQF3 203 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 A0A1W2PPW3 197 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 hCG_1807616A0A1W2PRN6 198 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 CHST10O43529 356 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 DLGAP3O95886 979 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 DEFA1P59665 94 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 DEFA3P59666 94 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ELF3P78545 371 aaPredicted RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 CHAF1BQ13112 559 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 C5orf22Q49AR2 442 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 NKAIN1Q4KMZ8 207 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 UBAP2Q5T6F2 1119 aaKnown RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 OR5K2Q8NHB8 316 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 COQ8BQ96D53 544 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ZNF831Q5JPB2 1677 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 COL11A2P13942 1736 aaPredicted RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 PTPRZ1P23471 2315 aaPredicted RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 PTGES3LE9PB15 166 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 NRP2O60462 931 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 TGDSO95455 350 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 CLPTM1O96005 669 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 RPS3P23396 243 aaKnown RBP eCLIP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 RPS9P46781 194 aaKnown RBP8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 RGRP47804 291 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 VLDLRP98155 873 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 MALLQ13021 153 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ANKRD26P1Q6NSI1 321 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 ZNF597Q96LX8 424 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 VDAC3Q9Y277 283 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 NFS1Q9Y697 457 aa8.24□□□□□ -1.09
FNDC3A-206ENST00000541916 OR5K3A6NET4 321 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 LMO7DNF2Z398 122 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 G3V3Y1 287 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 AREL1O15033 823 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 PRSS56P0CW18 603 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 PDHA2P29803 388 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 GPR3P46089 330 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 CSNK2A1P68400 391 aaPredicted RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 NKX3-2P78367 333 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 MEP1AQ16819 746 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 IFI44LQ53G44 452 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 EEF1A1P5Q5VTE0 462 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 ADGRD1Q6QNK2 874 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 ENDOVQ8N8Q3 282 aaKnown RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 NMD3Q96D46 503 aaKnown RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 ORAI3Q9BRQ5 295 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 MARCH4Q9P2E8 410 aaPredicted RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 NDRG3Q9UGV2 375 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 HHLA1C9JL84 531 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 STX16-NPEPL1H3BU86 382 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 TNFRSF11BO00300 401 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 EIF3FO00303 357 aaPredicted RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 STX16O14662 325 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 CD79AP11912 226 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 LEPRP48357 1165 aaKnown RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 CDH15P55291 814 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 PTCHD4Q6ZW05 846 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 PLPP6Q8IY26 295 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 CCDC54Q8NEL0 328 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 GPATCH1Q9BRR8 931 aaKnown RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 SP140LQ9H930 580 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 SMURF2Q9HAU4 748 aa8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 COL5A3P25940 1745 aaPredicted RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 CPSF4LA6NMK7 179 aaKnown RBP8.23□□□□□ -1.09
FNDC3A-206ENST00000541916 ECDO95905 644 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms