RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PAK4O96013 591 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 PRNPP04156 253 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GLAP06280 429 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GKP32189 559 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GGT2P36268 569 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 RPL35P42766 123 aaKnown RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 HMGCS1Q01581 520 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 OC90Q02509 493 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 C18orf21Q32NC0 220 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 MLIPQ5VWP3 458 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 FBXO46Q6PJ61 603 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 TMPRSS11AQ6ZMR5 421 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 UBE2R2Q712K3 238 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 ZNF605Q86T29 641 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CDH24Q86UP0 819 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CDK20Q8IZL9 346 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 PGBD5Q8N414 524 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TEX26Q8N6G2 289 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 C9orf43Q8TAL5 461 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 CD200R1Q8TD46 325 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 PXYLP1Q8TE99 480 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 LCN9Q8WX39 176 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 HSH2DQ96JZ2 352 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 APOLD1Q96LR9 279 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 JSRP1Q96MG2 331 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 RAD9AQ99638 391 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GPR62Q9BZJ7 368 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ZNF224Q9NZL3 707 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ZNF490Q9ULM2 529 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 HSPB11Q9Y547 144 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 STON1Q9Y6Q2 735 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 NBNO60934 754 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TFPIP10646 304 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 RHOQP17081 205 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 M6PRP20645 277 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ZNF10P21506 573 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 ERP29P30040 261 aaKnown RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 NUDT1P36639 197 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 VIPR2P41587 438 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SCN1BQ07699 218 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 STX4Q12846 297 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 MRPL58Q14197 206 aaKnown RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 PDGFRLQ15198 375 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TSTQ16762 297 aaKnown RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 ZNF542PQ5EBM4 170 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ARSIQ5FYB1 569 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 PIK3R6Q5UE93 754 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CNKSR3Q6P9H4 555 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 XKRXQ6PP77 449 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TMEM220Q6QAJ8 160 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SUSD1Q6UWL2 747 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 RSPO2Q6UXX9 243 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 CHRDL2Q6WN34 429 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 VTCN1Q7Z7D3 282 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SCD5Q86SK9 330 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ANKRD46Q86W74 232 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 C17orf64Q86WR6 236 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 RNF130Q86XS8 419 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CLDN19Q8N6F1 224 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 IER2Q9BTL4 223 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 OR2AG1Q9H205 316 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SAV1Q9H4B6 383 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 ASIC5Q9NY37 505 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GPR83Q9NYM4 423 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 NCDNQ9UBB6 729 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 HCSTQ9UBK5 93 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CCL27Q9Y4X3 112 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CACNA1HO95180 2353 aa5□□□□□ -1.61
PROM1-220ENST00000540805 A0A1W2PQ09 198 aa5□□□□□ -1.61
PROM1-220ENST00000540805 B4DGG1 531 aa5□□□□□ -1.61
PROM1-220ENST00000540805 GTPBP1O00178 669 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 RFXAPO00287 272 aa5□□□□□ -1.61
PROM1-220ENST00000540805 KPNA5O15131 536 aa5□□□□□ -1.61
PROM1-220ENST00000540805 GJB3O75712 270 aa5□□□□□ -1.61
PROM1-220ENST00000540805 POP4O95707 220 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 PDGFAP04085 211 aa5□□□□□ -1.61
PROM1-220ENST00000540805 CCNYL3P0C7X3 344 aa5□□□□□ -1.61
PROM1-220ENST00000540805 NR2F1P10589 423 aa5□□□□□ -1.61
PROM1-220ENST00000540805 HOXB2P14652 356 aa5□□□□□ -1.61
PROM1-220ENST00000540805 TYRP1P17643 537 aa5□□□□□ -1.61
PROM1-220ENST00000540805 MYL9P24844 172 aa5□□□□□ -1.61
PROM1-220ENST00000540805 CSKP41240 450 aa5□□□□□ -1.61
PROM1-220ENST00000540805 IDH2P48735 452 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 ARHGDIBP52566 201 aa5□□□□□ -1.61
PROM1-220ENST00000540805 ZNF140P52738 457 aaPredicted RBP5□□□□□ -1.61
PROM1-220ENST00000540805 RPS14P62263 151 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 TAGLNQ01995 201 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 ST3GAL4Q11206 333 aa5□□□□□ -1.61
PROM1-220ENST00000540805 CCINQ13939 588 aa5□□□□□ -1.61
PROM1-220ENST00000540805 DOC2BQ14184 412 aa5□□□□□ -1.61
PROM1-220ENST00000540805 EIF4HQ15056 248 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 MED22Q15528 200 aa5□□□□□ -1.61
PROM1-220ENST00000540805 BAK1Q16611 211 aa5□□□□□ -1.61
PROM1-220ENST00000540805 C9orf64Q5T6V5 341 aa5□□□□□ -1.61
PROM1-220ENST00000540805 METTL2BQ6P1Q9 378 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5□□□□□ -1.61
PROM1-220ENST00000540805 Q6ZPB1 254 aaPredicted RBP5□□□□□ -1.61
PROM1-220ENST00000540805 EIF3MQ7L2H7 374 aaKnown RBP5□□□□□ -1.61
PROM1-220ENST00000540805 GALNT10Q86SR1 603 aa5□□□□□ -1.61
PROM1-220ENST00000540805 ADAMTSL2Q86TH1 951 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms