RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SLC38A3Q99624 504 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 PTDSS2Q9BVG9 487 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 VN1R3Q9BXE9 311 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 B3GNT5Q9BYG0 378 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ABCG4Q9H172 646 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ANKRA2Q9H9E1 313 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 UCK1Q9HA47 277 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC22A11Q9NSA0 550 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC2A6Q9UGQ3 507 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 GPR160Q9UJ42 338 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 FNDC1Q4ZHG4 1894 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 COL4A6Q14031 1691 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 KDM4BO94953 1096 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SCG5P05408 212 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SFTPCP11686 197 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 NCF1P14598 390 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 NFKB1P19838 968 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 POU3F2P20265 443 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 PSMA1P25786 263 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 IDH2P48735 452 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ALDH9A1P49189 494 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 CYP4F8P98187 520 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 MRPL58Q14197 206 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 XKR7Q5GH72 579 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 INTS6LQ5JSJ4 861 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 CD276Q5ZPR3 534 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF57Q68EA5 555 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC25A25Q6KCM7 469 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 CNIH2Q6PI25 160 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM207Q6UWW9 146 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 RSPO2Q6UXX9 243 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 CHRDL2Q6WN34 429 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 TRMT11Q7Z4G4 463 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ZER1Q7Z7L7 766 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 MCATQ8IVS2 390 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 PHACTR4Q8IZ21 702 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 FTMTQ8N4E7 242 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 TBC1D19Q8N5T2 526 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 COQ8AQ8NI60 647 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 RAD51AP1Q96B01 352 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 MRPS24Q96EL2 167 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SCMH1Q96GD3 660 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF558Q96NG5 402 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 GAL3ST1Q99999 423 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SOSTQ9BQB4 213 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 MED10Q9BTT4 135 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SARGQ9BW04 601 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 GABARAPL3Q9BY60 117 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 NKX6-2Q9C056 277 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 OR51M1Q9H341 326 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 C8orf33Q9H7E9 229 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 EVA1AQ9H8M9 152 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 EQTNQ9NQ60 294 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 MS4A12Q9NXJ0 267 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF226Q9NYT6 803 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SEC14L4Q9UDX3 406 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 MIOXQ9UGB7 285 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 ENTPD4Q9Y227 616 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC6A5Q9Y345 797 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 INSL6Q9Y581 213 aa9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 CFAP20Q9Y6A4 193 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-243ENST00000540387 HYKKA2RU49 373 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SMIM30A4D0T7 59 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 GRXCR1A8MXD5 290 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 POP7O75817 140 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF682O95780 498 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 DHFRP00374 187 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 IGHV2-70P01814 119 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 ACADLP28330 430 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 ATP5C1P36542 298 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 KCNJ3P48549 501 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 KIAA1024LP59773 190 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 ERVK-25P63136 954 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC6A3Q01959 620 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 CTXN3Q4LDR2 81 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 C6orf136Q5SQH8 315 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 PRSS55Q6UWB4 352 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 MIB1Q86YT6 1006 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC39A11Q8N1S5 342 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 CLDN22Q8N7P3 220 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 WDR20Q8TBZ3 569 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM169Q96HH4 297 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 PKMYT1Q99640 499 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 DUSP16Q9BY84 665 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SEMA4CQ9C0C4 833 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SIK2Q9H0K1 926 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 DNTTIP1Q9H147 329 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 OR51J1Q9H342 316 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 ACTL8Q9H568 366 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SEMA4BQ9NPR2 832 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 DLL4Q9NR61 685 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM30AQ9NV96 361 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SH3BP4Q9P0V3 963 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 POMT2Q9UKY4 750 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 STUB1Q9UNE7 303 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 LTBP2Q14767 1821 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 SGK494L7N484 410 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 M0R129 80 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 PAGE1O75459 146 aa9.04□□□□□ -0.96
CTNNA1-243ENST00000540387 TOXO94900 526 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms