RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CANT1Q8WVQ1 401 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 SLCO4A1Q96BD0 722 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 TCTN2Q96GX1 697 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 TMEM74BQ9NUR3 256 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 PHF11Q9UIL8 331 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 RIMS3Q9UJD0 308 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 AK5Q9Y6K8 562 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 WDR87Q6ZQQ6 2873 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 TLCD2A6NGC4 264 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 CXCR6O00574 342 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 YKT6O15498 198 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 HRO43593 1189 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 KRT75O95678 551 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 RETP07949 1114 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 ALOX12P18054 663 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 UQCRC2P22695 453 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 EPHA8P29322 1005 aaPredicted RBP15.98■□□□□ 0.15
COPS3-212ENST00000539941 GPR3P46089 330 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 NUP107P57740 925 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 BNIP3Q12983 259 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 FADDQ13158 208 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 SLC14A1Q13336 389 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 TMEM214Q6NUQ4 689 aaKnown RBP15.98■□□□□ 0.15
COPS3-212ENST00000539941 ADGRG5Q8IZF4 528 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 CSNK1A1LQ8N752 337 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 PAPD5Q8NDF8 572 aaKnown RBP15.98■□□□□ 0.15
COPS3-212ENST00000539941 ZDHHC12Q96GR4 267 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 CCDC3Q9BQI4 270 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 SLC35A5Q9BS91 424 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 LRIT1Q9P2V4 623 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 ANAPC2Q9UJX6 822 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 ATG4BQ9Y4P1 393 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 SLC22A7Q9Y694 548 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 RNF215Q9Y6U7 377 aa15.98■□□□□ 0.15
COPS3-212ENST00000539941 A0A1B0GTQ1 180 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 A0A1W2PR48 441 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 CCDC160A6NGH7 325 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 SLC9B1P1A6NJY1 282 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 PROM1O43490 865 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 B3GALT2O43825 422 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 SRPX2O60687 465 aaPredicted RBP15.97■□□□□ 0.15
COPS3-212ENST00000539941 AIFM1O95831 613 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 TFAP2AP05549 437 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 GIMD1P0DJR0 217 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 GLB1P16278 677 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 MANFP55145 182 aaKnown RBP15.97■□□□□ 0.15
COPS3-212ENST00000539941 VAC14Q08AM6 782 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 NR1D2Q14995 579 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 RGNQ15493 299 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 C10orf111Q8N326 155 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 OR52N2Q8NGI0 321 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 ZFP28Q8NHY6 868 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 PSMA8Q8TAA3 256 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 FIG4Q92562 907 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 EXOSC8Q96B26 276 aaKnown RBP15.97■□□□□ 0.15
COPS3-212ENST00000539941 DUSP23Q9BVJ7 150 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 CHST8Q9H2A9 424 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 SLC35C2Q9NQQ7 365 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 ZSCAN32Q9NX65 697 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 MS4A12Q9NXJ0 267 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 NLGN3Q9NZ94 848 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 UTS2RQ9UKP6 389 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 FBXW2Q9UKT8 454 aa15.97■□□□□ 0.15
COPS3-212ENST00000539941 HTR3EA5X5Y0 456 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 PRAMEF10O60809 474 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 KCNK5O95279 499 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 FCGR1AP12314 374 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 ZNF12P17014 697 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 NTSP30990 170 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 BUD31P41223 144 aaPredicted RBP15.96■□□□□ 0.15
COPS3-212ENST00000539941 VEZF1Q14119 521 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 TRIP10Q15642 601 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 VMACQ2NL98 169 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 ZNF528Q3MIS6 628 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 TBCELQ5QJ74 424 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 ZCCHC8Q6NZY4 707 aaKnown RBP15.96■□□□□ 0.15
COPS3-212ENST00000539941 SLC48A1Q6P1K1 146 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 CEP68Q76N32 757 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 ZNF551Q7Z340 670 aaPredicted RBP15.96■□□□□ 0.15
COPS3-212ENST00000539941 SLC35F3Q8IY50 421 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 ZZZ3Q8IYH5 903 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 DNAJC22Q8N4W6 341 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 ZCCHC10Q8TBK6 192 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 PIGKQ92643 395 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 FAM162AQ96A26 154 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 MAP3K3Q99759 626 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 IL21RQ9HBE5 538 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 LYRM4Q9HD34 91 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 SLAMF7Q9NQ25 335 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 OLAHQ9NV23 265 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 CES1P1Q9UKY3 287 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 PSME2Q9UL46 239 aa15.96■□□□□ 0.15
COPS3-212ENST00000539941 CREG1O75629 220 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 CAPNS1P04632 268 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 NR2F6P10588 404 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 IL1RNP18510 177 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 SOX11P35716 441 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 CHI3L1P36222 383 aaPredicted RBP15.95■□□□□ 0.14
COPS3-212ENST00000539941 GPLD1P80108 840 aa15.95■□□□□ 0.14
COPS3-212ENST00000539941 FOLH1Q04609 750 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms