RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ATN1P54259 1190 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 MRPS15P82914 257 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 ZNF91Q05481 1191 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 HYAL2Q12891 473 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 FOXD4Q12950 439 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 CLPPQ16740 277 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 ZNF284Q2VY69 593 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TBRG1Q3YBR2 411 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 ZNF658BQ4V348 819 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 SLC25A30Q5SVS4 291 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SAXO2Q658L1 398 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TCTN3Q6NUS6 607 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TMEM220Q6QAJ8 160 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 NXPE4Q6UWF7 544 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TECPR1Q7Z6L1 1165 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 PHC2Q8IXK0 858 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 PIAS4Q8N2W9 510 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 CLDN22Q8N7P3 220 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 PSD4Q8NDX1 1056 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 GPR32P1Q8NGA4 272 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SLC38A5Q8WUX1 472 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 NEURL3Q96EH8 262 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SLC6A18Q96N87 628 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TSSK6Q9BXA6 273 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SLC6A16Q9GZN6 736 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TMEM245Q9H330 911 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 CXorf36Q9H7Y0 433 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 RMI1Q9H9A7 625 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TIGARQ9NQ88 270 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TAAR2Q9P1P5 351 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 MAFFQ9ULX9 164 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SNX7Q9UNH6 387 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TSPAN11A1L157 253 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 A6NL46 340 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 C5orf58C9J3I9 102 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 LEFTY2O00292 366 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 WWP2O00308 870 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 CDRT1O95170 752 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 RB1P06400 928 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 H1F0P07305 194 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 IL3P08700 152 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 IGFBP1P08833 259 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 FEN1P39748 380 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 SMIM11AP58511 58 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 ALDH6A1Q02252 535 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 C1DQ13901 141 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 HEPACAMQ14CZ8 416 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 ERAP2Q6P179 960 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 CEACAM20Q6UY09 585 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 HSDL2Q6YN16 418 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 VASH1Q7L8A9 365 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 NANOGNBQ7Z5D8 188 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 GALNT12Q8IXK2 581 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 RDH10Q8IZV5 341 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 FAM26EQ8N5C1 309 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 HORMAD2Q8N7B1 307 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 TCEANCQ8N8B7 351 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 GDPD1Q8N9F7 314 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 CREB3L4Q8TEY5 395 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 RNF170Q96K19 258 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 DEPDC7Q96QD5 511 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 TEFMQ96QE5 360 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 FUZQ9BT04 418 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 RSPO3Q9BXY4 272 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 NDEL1Q9GZM8 345 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 POLR2J3Q9H1A7 115 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 MIXL1Q9H2W2 232 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 TXNL4BQ9NX01 149 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 DIMT1Q9UNQ2 313 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 CENPFP49454 3210 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 TRAV19A0A0A6YYK7 116 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 CCDC182A6NF36 153 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 H3BN98 237 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 OR10H3O60404 316 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 TBX19O60806 448 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 SEMA7AO75326 666 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 PDE9AO76083 593 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 SOX14O95416 240 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 TP53P04637 393 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 CPEP16870 476 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 RECQLP46063 649 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 KCNJ5P48544 419 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 LBX1P52954 281 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 BNC1Q01954 994 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 RPS26P11Q5JNZ5 115 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 LHX8Q68G74 356 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 PGBD2Q6P3X8 592 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 FAM131AQ6UXB0 335 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 WDR53Q7Z5U6 358 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 LRRC56Q8IYG6 542 aaPredicted RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 NATD1Q8N6N6 113 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 OR9A1PQ8NGU1 263 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 SETD7Q8WTS6 366 aaKnown RBP9.19□□□□□ -0.94
CDH13-204ENST00000539548 C17orf50Q8WW18 174 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 SLC5A11Q8WWX8 675 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 OR5P2Q8WZ92 322 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 SLC7A6Q92536 515 aa9.19□□□□□ -0.94
CDH13-204ENST00000539548 UBE2E3Q969T4 207 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms