RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 FRMD6Q96NE9 622 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 FUZQ9BT04 418 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 SLC2A11Q9BYW1 496 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 GSTO2Q9H4Y5 243 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 DUX1O43812 170 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 OAZ2O95190 189 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 GSRP00390 522 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 S100A6P06703 90 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 SCGB2B2Q4G0G5 96 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 PAGE3Q5JUK9 113 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 LGALS12Q96DT0 336 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 PGAP3Q96FM1 320 aaPredicted RBP13.92□□□□□ -0.18
CACNB1-206ENST00000539338 DHRS4Q9BTZ2 278 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 USP54Q70EL1 1684 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 NHSL1Q5SYE7 1610 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 FEZF1A0PJY2 475 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF670-ZNF695F2Z2N8 137 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 ATF6P18850 670 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 OR3A3P47888 321 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 OR3A2P47893 321 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 UGT8Q16880 541 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 IER5LQ5T953 404 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 FANK1Q8TC84 345 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 ENAMQ9NRM1 1142 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 ASGR2P07307 311 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 PDHA2P29803 388 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 ARFRP1Q13795 201 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 RAB33AQ14088 237 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 LETMD1Q6P1Q0 360 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF367Q7RTV3 350 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 JAGN1Q8N5M9 183 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 MR1Q95460 341 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 MAL2Q969L2 176 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 CDC6Q99741 560 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 EMCNQ9ULC0 261 aa13.92□□□□□ -0.18
CACNB1-206ENST00000539338 ETFAP13804 333 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 FADDQ13158 208 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 PMS2P3Q13401 168 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 KLHL26Q53HC5 615 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 STX12Q86Y82 276 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF615Q8N8J6 731 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 UTP4Q969X6 686 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 RAB7BQ96AH8 199 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 ZDHHC12Q96GR4 267 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 C14orf105Q9NVL8 296 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 MED11Q9P086 117 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 ZNF639Q9UID6 485 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 EXOSC1Q9Y3B2 195 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 H0YJX3 145 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SLC1A7O00341 560 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 DLGAP1O14490 977 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 CD63P08962 238 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 CD70P32970 193 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 EIF1AXP47813 144 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SLC9A3P48764 834 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 CLCA4Q14CN2 919 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 TMEM240Q5SV17 173 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 PRAMEF17Q5VTA0 474 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 GALNT7Q86SF2 657 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 GALNT12Q8IXK2 581 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SCML4Q8N228 414 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 Q8N9G6 341 aaPredicted RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 OR5T3Q8NGG3 340 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 DOK4Q8TEW6 326 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 FUNDC2Q9BWH2 189 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SEC61A2Q9H9S3 476 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 DOT1LQ8TEK3 1739 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 PCP4L1A6NKN8 68 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 MT-ND5P03915 603 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 PEPDP12955 493 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 ITIH1P19827 911 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 HSF5Q4G112 596 aaPredicted RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 GTF2IRD2BQ6EKJ0 949 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 THOC7Q6I9Y2 204 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 FAM180BQ6P0A1 224 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 GTF2IRD2Q86UP8 949 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 OR4K14Q8NGD5 310 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SNIP1Q8TAD8 396 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 BBS10Q8TAM1 723 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 NAT6Q93015 286 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SLC29A1Q99808 456 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 OR5K4A6NMS3 321 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 MTRF1O75570 445 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 PGAM2P15259 253 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 DECR1Q16698 335 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SLC27A4Q6P1M0 643 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 LHFPL3Q86UP9 236 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 METTL27Q8N6F8 245 aaPredicted RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 ZBTB8BQ8NAP8 495 aaPredicted RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 FRS2Q8WU20 508 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 TMIGD2Q96BF3 282 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 CLSTN3Q9BQT9 956 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 CNOT11Q9UKZ1 510 aaKnown RBP13.91□□□□□ -0.18
CACNB1-206ENST00000539338 SARDHQ9UL12 918 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 NENFQ9UMX5 172 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 MAU2Q9Y6X3 613 aa13.91□□□□□ -0.18
CACNB1-206ENST00000539338 FAAHO00519 579 aa13.9□□□□□ -0.18
CACNB1-206ENST00000539338 MYF6P23409 242 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms