RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NCOA7Q8NI08 942 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 RAD54LQ92698 747 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 EXOC4Q96A65 974 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 SIPA1Q96FS4 1042 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 IMMP1LQ96LU5 166 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 FER1L6-AS2Q96M78 137 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 MTIF3Q9H2K0 278 aaKnown RBP3.1□□□□□ -1.91
CCDC7-209ENST00000539197 CUEDC2Q9H467 287 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 MED17Q9NVC6 651 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 ZFP37Q9Y6Q3 630 aaPredicted RBP3.1□□□□□ -1.91
CCDC7-209ENST00000539197 TNRQ92752 1358 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 NACAE9PAV3 2078 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 PDXKO00764 312 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 FLRT2O43155 660 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 PPIP5K2O43314 1243 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 LATO43561 262 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 ACSL4O60488 711 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 VIMP08670 466 aaKnown RBP3.09□□□□□ -1.91
CCDC7-209ENST00000539197 CCDC159P0C7I6 412 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 BDNFP23560 247 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 PSMB4P28070 264 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 PPP2R1BP30154 601 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 NPY4RP50391 375 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 CAPZA1P52907 286 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 SHEQ5VZ18 495 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 CLEC4GQ6UXB4 293 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 C4orf19Q8IY42 314 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 SETD6Q8TBK2 473 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 HEXDCQ8WVB3 486 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 GBP5Q96PP8 586 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 RTBDNQ9BSG5 229 aaPredicted RBP3.09□□□□□ -1.91
CCDC7-209ENST00000539197 INPP5KQ9BT40 448 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 AP1M1Q9BXS5 423 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 TMEM9Q9P0T7 183 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 NFKBIL1Q9UBC1 381 aaPredicted RBP3.09□□□□□ -1.91
CCDC7-209ENST00000539197 GMEB2Q9UKD1 530 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 KLK12Q9UKR0 248 aa3.09□□□□□ -1.91
CCDC7-209ENST00000539197 A0A087WV48 116 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 MAGEB4O15481 346 aaPredicted RBP3.08□□□□□ -1.92
CCDC7-209ENST00000539197 FOXH1O75593 365 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 FHP07954 510 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 SLC35E2P0CK97 266 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 P4HA1P13674 534 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 HSD17B1P14061 328 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 CRKLP46109 303 aaKnown RBP3.08□□□□□ -1.92
CCDC7-209ENST00000539197 ZNF41P51814 821 aaPredicted RBP3.08□□□□□ -1.92
CCDC7-209ENST00000539197 FAM91A1Q658Y4 838 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 GCNT7Q6ZNI0 430 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 SLFN11Q7Z7L1 901 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 NLRP14Q86W24 1093 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 APOBEC3FQ8IUX4 373 aaKnown RBP3.08□□□□□ -1.92
CCDC7-209ENST00000539197 GPR137CQ8N3F9 429 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 ARL14Q8N4G2 192 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 BAG1Q99933 345 aaPredicted RBP3.08□□□□□ -1.92
CCDC7-209ENST00000539197 ST6GALNAC4Q9H4F1 302 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 S100A14Q9HCY8 104 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 CYTL1Q9NRR1 136 aa3.08□□□□□ -1.92
CCDC7-209ENST00000539197 NOCTQ9UK39 431 aaKnown RBP3.08□□□□□ -1.92
CCDC7-209ENST00000539197 HTR3EA5X5Y0 456 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 DKC1O60832 514 aaKnown RBP eCLIP3.07□□□□□ -1.92
CCDC7-209ENST00000539197 LYNP07948 512 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 FCGR3AP08637 254 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 RPP38P78345 283 aaKnown RBP3.07□□□□□ -1.92
CCDC7-209ENST00000539197 MKXQ8IYA7 352 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 ZNF721Q8TF20 911 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 ZNF274Q96GC6 653 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-209ENST00000539197 CASD1Q96PB1 797 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 TECTBQ96PL2 329 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 ZNF184Q99676 751 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-209ENST00000539197 CCM2Q9BSQ5 444 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 SCRT1Q9BWW7 348 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 VIPAS39Q9H9C1 493 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 KLRF1Q9NZS2 232 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 EXOC6BQ9Y2D4 811 aa3.07□□□□□ -1.92
CCDC7-209ENST00000539197 RNF212BA8MTL3 300 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 FCGR3BO75015 233 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 PRAMEF12O95522 483 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 GBAP04062 536 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 HSP90AA1P07900 732 aaKnown RBP3.06□□□□□ -1.92
CCDC7-209ENST00000539197 ANKRD34CP0C6C1 535 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 TSPY3P0CV98 308 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 TSPY8P0CW00 308 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 FOSL2P15408 326 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 P2RY4P51582 365 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 NAGLUP54802 743 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 GNB2P62879 340 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 CETN1Q12798 172 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 LCP2Q13094 533 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 CEACAM7Q14002 265 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 CDO1Q16878 200 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 TWISTNBQ3B726 338 aaPredicted RBP3.06□□□□□ -1.92
CCDC7-209ENST00000539197 TXNRD3NBQ6F5E7 133 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 ZNF730Q6ZMV8 503 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 CACUL1Q86Y37 369 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 TMEM99Q8N816 258 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 SAP25Q8TEE9 199 aa3.06□□□□□ -1.92
CCDC7-209ENST00000539197 BSCL2Q96G97 398 aaPredicted RBP3.06□□□□□ -1.92
CCDC7-209ENST00000539197 ELL3Q9HB65 397 aaPredicted RBP3.06□□□□□ -1.92
CCDC7-209ENST00000539197 KLHL21Q9UJP4 597 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms