RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 H0YIG0 161 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 NVLO15381 856 aaKnown RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 GYG2O15488 501 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 CPNE3O75131 537 aaKnown RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 CDC123O75794 336 aaPredicted RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 KCNH1O95259 989 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 ANP32DO95626 131 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 NTRK1P04629 796 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 HBQ1P09105 142 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 CDK4P11802 303 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 FGF5P12034 268 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 ITGAXP20702 1163 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 ETV5P41161 510 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 GCGRP47871 477 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 RASSF2P50749 326 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 ID2Q02363 134 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 CAPRIN1Q14444 709 aaKnown RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 IL11RAQ14626 422 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 PRSS53Q2L4Q9 553 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 MFSD4BQ5TF39 518 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 ANXA8L1Q5VT79 327 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 RHBDD2Q6NTF9 364 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 SLC48A1Q6P1K1 146 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 C16orf89Q6UX73 402 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 MSANTD1Q6ZTZ1 278 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 YTHDF3Q7Z739 585 aaKnown RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 SHISA5Q8N114 240 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 RBM15BQ8NDT2 890 aaKnown RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 VPS37AQ8NEZ2 397 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 OR4A15Q8NGL6 344 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 PMEPA1Q969W9 287 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 BBS4Q96RK4 519 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 RPF2Q9H7B2 306 aaKnown RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 ZNF304Q9HCX3 659 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 ENAMQ9NRM1 1142 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 GID8Q9NWU2 228 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 EHD3Q9NZN3 535 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 KCMF1Q9P0J7 381 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 TRPC4Q9UBN4 977 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 MRPS33Q9Y291 106 aaKnown RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 TMEM184BQ9Y519 407 aaPredicted RBP13.33□□□□□ -0.28
CD4-208ENST00000538827 B4E171 279 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 RFXANKO14593 260 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 PGRMC2O15173 223 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 TBX19O60806 448 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 B4GALT2O60909 372 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 C6orf47O95873 294 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 C8orf89P0DMQ9 161 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 PTPN4P29074 926 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 TSPAN7P41732 249 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 XCR1P46094 333 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 HNRNPFP52597 415 aaKnown RBP13.32□□□□□ -0.28
CD4-208ENST00000538827 WNT3P56703 355 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 RAB15P59190 212 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 PHC1P78364 1004 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 HSPB3Q12988 150 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 DSG2Q14126 1118 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 TLR1Q15399 786 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 TRMT5Q32P41 509 aaKnown RBP13.32□□□□□ -0.28
CD4-208ENST00000538827 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
CD4-208ENST00000538827 DNAL1Q4LDG9 190 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 COQ5Q5HYK3 327 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 PRMT9Q6P2P2 845 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 CEACAM20Q6UY09 585 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 BPHLQ86WA6 291 aaPredicted RBP13.32□□□□□ -0.28
CD4-208ENST00000538827 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 OR8J2Q8NGG1 315 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 OR51Q1Q8NH59 317 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 ZFP28Q8NHY6 868 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 MIEF2Q96C03 454 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 SLC7A6OSQ96CW6 309 aaPredicted RBP13.32□□□□□ -0.28
CD4-208ENST00000538827 COQ8BQ96D53 544 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 PANX1Q96RD7 426 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 INPP5KQ9BT40 448 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 CCDC86Q9H6F5 360 aaKnown RBP13.32□□□□□ -0.28
CD4-208ENST00000538827 SLC52A3Q9NQ40 469 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 SLC35C2Q9NQQ7 365 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 NDE1Q9NXR1 346 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 CROTQ9UKG9 612 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 PCDHB3Q9Y5E6 796 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 ZNF780BQ9Y6R6 833 aa13.32□□□□□ -0.28
CD4-208ENST00000538827 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 A0A1W2PRB8 838 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 WASHC1A8K0Z3 465 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 ANKRD65E5RJM6 399 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 LDB3O75112 727 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 GSNP06396 782 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 FHP07954 510 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 KRT16P08779 473 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 ZNF28P17035 718 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 GPC1P35052 558 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 FEN1P39748 380 aaKnown RBP13.31□□□□□ -0.28
CD4-208ENST00000538827 CDKN2CP42773 168 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 NCBP2P52298 156 aaKnown RBP eCLIP13.31□□□□□ -0.28
CD4-208ENST00000538827 SLC13A2Q13183 592 aa13.31□□□□□ -0.28
CD4-208ENST00000538827 EIF3IQ13347 325 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms