RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 IRF8Q02556 426 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 EEF1A2Q05639 463 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 DDX39BQ13838 428 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 CHRNA6Q15825 494 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 FLYWCH1Q4VC44 716 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 KLHL22Q53GT1 634 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 ATAT1Q5SQI0 421 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 WDR53Q7Z5U6 358 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 OXR1Q8N573 874 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 GOT1L1Q8NHS2 421 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 C19orf43Q9BQ61 176 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC35A5Q9BS91 424 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 NT5DC2Q9H857 520 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 C1GALT1Q9NS00 363 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 GSTK1Q9Y2Q3 226 aa17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 YARS2Q9Y2Z4 477 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-207ENST00000538548 ISM1B1AKI9 464 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 TRIM77I1YAP6 450 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 HPGDSO60760 199 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 RAB36O95755 333 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 CHRM5P08912 532 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 NSG1P42857 185 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 EVX1P49640 407 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 BTG1P62324 171 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 RPS25P62851 125 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF630Q2M218 657 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 CRTC2Q53ET0 693 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 QSOX2Q6ZRP7 698 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 KCTD20Q7Z5Y7 419 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 KIF18BQ86Y91 864 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 TCEANCQ8N8B7 351 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 ZNF431Q8TF32 576 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 ZSCAN5AQ9BUG6 496 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 DNMT3AQ9Y6K1 912 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 TRBV4-1A0A0J9YWV2 114 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 MGAT4DA6NG13 374 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 HEPACAM2A8MVW5 462 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 H3BN98 237 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 HK1P19367 917 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 CD22P20273 847 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 TALDO1P37837 337 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 XKP51811 444 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 PCBP3P57721 371 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 WDR5P61964 334 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 HBA1P69905 142 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 RAE1P78406 368 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 RNF219Q5W0B1 726 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 TRIM40Q6P9F5 258 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 CEACAM20Q6UY09 585 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 BCDIN3DQ7Z5W3 292 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 OR52I1Q8NGK6 324 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 HUS1BQ8NHY5 278 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 SKA2Q8WVK7 121 aaPredicted RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 ASB11Q8WXH4 323 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 TM9SF4Q92544 642 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 SLC28A3Q9HAS3 691 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 MGAT4BQ9UQ53 548 aa17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 SF3B6Q9Y3B4 125 aaKnown RBP17.71■□□□□ 0.43
SFSWAP-207ENST00000538548 A0A0U1RQF3 1178 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 CHP2O43745 196 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 IGFBP1P08833 259 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 BPIP17213 487 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 CCR7P32248 378 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 ETV5P41161 510 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 ETV1P50549 477 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 CAV3P56539 151 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 WNT4P56705 351 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 CDH18Q13634 790 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 RANBP3Q9H6Z4 567 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 PCDHB7Q9Y5E2 793 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 C2orf78A6NCI8 922 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 RECKO95980 971 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 RAF1P04049 648 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 TPOP07202 933 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 ZNF250P15622 560 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 HLA-FP30511 346 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 FGF9P31371 208 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 RHOAP61586 193 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 TPBGQ13641 420 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 TMEM65Q6PI78 240 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 TRILQ7L0X0 811 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 TIGD4Q8IY51 512 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 PHF21AQ96BD5 680 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 BHLHE41Q9C0J9 482 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 RAB23Q9ULC3 237 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 MGAT4AQ9UM21 535 aa17.7■□□□□ 0.42
SFSWAP-207ENST00000538548 A0A1B0GVM2 712 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 FFAR1O14842 300 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 NR2F6P10588 404 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 HSD3B1P14060 373 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 HSD3B2P26439 372 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ETV3P41162 512 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 SGSHP51688 502 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 CRHR2Q13324 411 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 TMEM107Q6UX40 140 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ANKS3Q6ZW76 656 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 CHST9Q7L1S5 443 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 CXorf40BQ96DE9 158 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 PKP4Q99569 1192 aa17.69■□□□□ 0.42
SFSWAP-207ENST00000538548 ATG10Q9H0Y0 220 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms