RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SLC6A12P48065 614 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 HNMTP50135 292 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 AGFG1P52594 562 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 SERTAD2Q14140 314 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 POU4F3Q15319 338 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 PCBP2Q15366 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 TSNQ15631 228 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 FBXL19-AS1Q494R0 122 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 FBXO48Q5FWF7 155 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 MAATS1Q7Z4T9 603 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 GALNT7Q86SF2 657 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 LRRC25Q8N386 305 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 OR10G3Q8NGC4 313 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 PAQR8Q8TEZ7 354 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 SPACA9Q96E40 222 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 CFAP36Q96G28 342 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 MAPKAP1Q9BPZ7 522 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 PLEKHF2Q9H8W4 249 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 PLAC1Q9HBJ0 212 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 NEUROD4Q9HD90 331 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 SH2D2AQ9NP31 389 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 CORO1CQ9ULV4 474 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 OARD1Q9Y530 152 aa12.88□□□□□ -0.35
SMARCA4-206ENST00000538456 CLCA1A8K7I4 914 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 HRKO00198 91 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 CLGNO14967 610 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 EPPINO95925 133 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 IL2RAP01589 272 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 EPXP11678 715 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 CEACAM8P31997 349 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 KCNC1P48547 511 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 ZNF136P52737 540 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 DCAF7P61962 342 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 CDKL1Q00532 357 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 TGM3Q08188 693 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 DUSP8Q13202 625 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 PPP1R7Q15435 360 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 TRMT10BQ6PF06 316 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 ZNF793Q6ZN11 406 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 KIF18BQ86Y91 864 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 KRTAP1-3Q8IUG1 177 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 LACC1Q8IV20 430 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 OR4N5Q8IXE1 308 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 VWA5B2Q8N398 1253 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 DOK4Q8TEW6 326 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 ANKRD9Q96BM1 317 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 PPWD1Q96BP3 646 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 RHBDF1Q96CC6 855 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 SENP5Q96HI0 755 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 DGAT2Q96PD7 388 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 KCNC2Q96PR1 638 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 GAL3ST4Q96RP7 486 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 DOHHQ9BU89 302 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 NT5DC2Q9H857 520 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 PROK2Q9HC23 129 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 LYRM4Q9HD34 91 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 PRDM7Q9NQW5 492 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 CTNNAL1Q9UBT7 734 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 FOXD3Q9UJU5 478 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 CHCHD2Q9Y6H1 151 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 CSPG4Q6UVK1 2322 aa12.87□□□□□ -0.35
SMARCA4-206ENST00000538456 RTCAO00442 366 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 FGF17O60258 216 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 PRAMEF4O60810 478 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 SH3BGRLO75368 114 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 HEXAP06865 529 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 MSH2P43246 934 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 NKX6-1P78426 367 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 CRYZQ08257 329 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 PRAMEF9Q5VWM5 478 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 LYPD8Q6UX82 237 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 DGAT2L6Q6ZPD8 337 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 ADAMTSL2Q86TH1 951 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 NKAPQ8N5F7 415 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 ACOT4Q8N9L9 421 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 SNX31Q8N9S9 440 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 NUDT8Q8WV74 236 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 ANKRD49Q8WVL7 239 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 HSPBAP1Q96EW2 488 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 NAT9Q9BTE0 207 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 EPB41L4BQ9H329 900 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 QPCTLQ9NXS2 382 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 WWOXQ9NZC7 414 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 ASIC3Q9UHC3 531 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 ZNF490Q9ULM2 529 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 CHMP2BQ9UQN3 213 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 PSAT1Q9Y617 370 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 SPACA6W5XKT8 324 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 ARID1AO14497 2285 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 MED12Q93074 2177 aa12.86□□□□□ -0.35
SMARCA4-206ENST00000538456 FAM95CA0A1B0GW59 222 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms