RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CAPN3P20807 821 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 NT5EP21589 574 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 IL10P22301 178 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PGM1P36871 562 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FEN1P39748 380 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 XKP51811 444 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CLDN6P56747 220 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SLC25A3Q00325 362 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 HSPB3Q12988 150 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RCAN2Q14206 197 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 UGT8Q16880 541 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SYT16Q17RD7 645 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 LACTB2Q53H82 288 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 COQ5Q5HYK3 327 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MRM1Q6IN84 353 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SLC48A1Q6P1K1 146 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DNAJC14Q6Y2X3 702 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MSANTD1Q6ZTZ1 278 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PDSS2Q86YH6 399 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 OR4N5Q8IXE1 308 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ZNF595Q8IYB9 648 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DEFB107AQ8IZN7 70 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C7orf57Q8NEG2 295 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ANKK1Q8NFD2 765 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 NUDT8Q8WV74 236 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TBC1D20Q96BZ9 403 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 COQ8BQ96D53 544 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RBM18Q96H35 190 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MAGED4Q96JG8 741 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 HOPXQ9BPY8 73 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 THTPAQ9BU02 230 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 THUMPD3Q9BV44 507 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ZNF717Q9BY31 904 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 APMAPQ9HDC9 416 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SLC35C2Q9NQQ7 365 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 EHD3Q9NZN3 535 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C5AR2Q9P296 337 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ZNF282Q9UDV7 671 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PCDHB3Q9Y5E6 796 aa10.06□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C15orf38-AP3S2A0A0A6YYH1 394 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RNASET2O00584 256 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SLC30A4O14863 429 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PLD2O14939 933 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ERN1O75460 977 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PRKRAO75569 313 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DNAJC8O75937 253 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C6orf47O95873 294 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 NPPAP01160 153 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 GSNP06396 782 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 HEXBP07686 556 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PORP16435 677 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ITIH1P19827 911 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TRPC1P48995 793 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C21orf58P58505 322 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PSME3P61289 254 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ID2Q02363 134 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TARDBPQ13148 414 aaKnown RBP eCLIP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ERV3-1Q14264 604 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RSPO4Q2I0M5 234 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TRMT5Q32P41 509 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 NKAIN1Q4KMZ8 207 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CDCP2Q5VXM1 449 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RHBDD2Q6NTF9 364 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 BNC2Q6ZN30 1099 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ARPINQ7Z6K5 226 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TMPRSS12Q86WS5 348 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RIMKLAQ8IXN7 391 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CCDC116Q8IYX3 515 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MMP21Q8N119 569 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 OR8J2Q8NGG1 315 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DNAJB14Q8TBM8 379 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 METTL21AQ8WXB1 218 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 OR5P2Q8WZ92 322 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CIDECQ96AQ7 238 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MIEF2Q96C03 454 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 LRRC58Q96CX6 371 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C11orf24Q96F05 449 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 LIN37Q96GY3 246 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 PTCHD1Q96NR3 888 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 DGAT2Q96PD7 388 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ECSITQ9BQ95 431 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 RAD21L1Q9H4I0 556 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 ACTL8Q9H568 366 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 C3orf14Q9HBI5 128 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MKKSQ9NPJ1 570 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SIDT1Q9NXL6 827 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 KCMF1Q9P0J7 381 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 BTNL2Q9UIR0 455 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MAP4K5Q9Y4K4 846 aa10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-211ENST00000538363 A0A096LPI6 279 aa10.04□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MYOCOSA0A1B0GUC4 107 aa10.04□□□□□ -0.8
TNFRSF1A-211ENST00000538363 MEN1O00255 615 aa10.04□□□□□ -0.8
TNFRSF1A-211ENST00000538363 FBP2O00757 339 aa10.04□□□□□ -0.8
TNFRSF1A-211ENST00000538363 GSTA4O15217 222 aa10.04□□□□□ -0.8
TNFRSF1A-211ENST00000538363 TBX19O60806 448 aa10.04□□□□□ -0.8
TNFRSF1A-211ENST00000538363 CTNSO60931 367 aa10.04□□□□□ -0.8
TNFRSF1A-211ENST00000538363 LDB3O75112 727 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms