RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 HSDL2Q6YN16 418 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 CISD2Q8N5K1 135 aaKnown RBP6.84□□□□□ -1.32
MSH6-209ENST00000538136 PCYOX1LQ8NBM8 494 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 OR4K17Q8NGC6 315 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 ASB15Q8WXK1 588 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 FBXL8Q96CD0 374 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 REXO5Q96IC2 774 aaKnown RBP6.84□□□□□ -1.32
MSH6-209ENST00000538136 MAGEB18Q96M61 343 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 C5orf34Q96MH7 638 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 TMEM79Q9BSE2 394 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 RMND5AQ9H871 391 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 PPCSQ9HAB8 311 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 WASH6PQ9NQA3 447 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 ATAD3AQ9NVI7 634 aa6.84□□□□□ -1.32
MSH6-209ENST00000538136 A0A1B0GX78 115 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 BCKDHAP12694 445 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 NQO1P15559 274 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 XRCC1P18887 633 aaPredicted RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 HIST1H1TP22492 207 aaPredicted RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 ADARP55265 1226 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 PLCXD2Q0VAA5 305 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 LAPTM5Q13571 262 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 HERC3Q15034 1050 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 BCL7AQ4VC05 210 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 C6orf136Q5SQH8 315 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 CPZQ66K79 652 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ZNF574Q6ZN55 896 aaPredicted RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 SLCO4C1Q6ZQN7 724 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 MEX3DQ86XN8 651 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 FAM174AQ8TBP5 190 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 SEC16BQ96JE7 1060 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 CLPTM1LQ96KA5 538 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 C20orf27Q9GZN8 174 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 EPB41L4BQ9H329 900 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 TNFRSF12AQ9NP84 129 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 MKKSQ9NPJ1 570 aaPredicted RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 POMT2Q9UKY4 750 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 MAPRE3Q9UPY8 281 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 GPR89AB7ZAQ6 455 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 BMP10O95393 424 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 PRB1P04280 392 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 GPR89BP0CG08 455 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 GCAP28676 217 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 IFNA8P32881 189 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ATP6V1E1P36543 226 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 PGM1P36871 562 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ABATP80404 500 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ZSCAN26Q16670 478 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 OTUD3Q5T2D3 398 aaPredicted RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 CAPRIN2Q6IMN6 1127 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 RNF111Q6ZNA4 994 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 GPAT4Q86UL3 456 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 TRIML2Q8N7C3 387 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 OR5M9Q8NGP3 310 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ZNF473Q8WTR7 871 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 LOXL4Q96JB6 756 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 FOLH1BQ9HBA9 442 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 C19orf25Q9UFG5 118 aaPredicted RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 SRPK3Q9UPE1 567 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 MED16Q9Y2X0 877 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 AP1M2Q9Y6Q5 423 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 FAM47E-STBD1D6RA91 191 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 CCDC22O60826 627 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ZGLP1P0C6A0 271 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 MTHFD2P13995 350 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 POU2F1P14859 743 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ZNF24P17028 368 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 NELFEP18615 380 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 CCT3P49368 545 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 SLC7A2P52569 658 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 NRG3P56975 720 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 CSTF3Q12996 717 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 GRAMD1BQ3KR37 738 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 RGS9BPQ6ZS82 235 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 MTERF4Q7Z6M4 381 aaKnown RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 ANKRD53Q8N9V6 530 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 COL21A1Q96P44 957 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 TAAR9Q96RI9 348 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 IER2Q9BTL4 223 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ACPTQ9BZG2 426 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 EPS8L2Q9H6S3 715 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 ATP13A2Q9NQ11 1180 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 LHX9Q9NQ69 397 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 GPR83Q9NYM4 423 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 DNMT3AQ9Y6K1 912 aaPredicted RBP6.83□□□□□ -1.32
MSH6-209ENST00000538136 NLRC5Q86WI3 1866 aa6.83□□□□□ -1.32
MSH6-209ENST00000538136 TRGV8A0A0C4DH27 118 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 NPIPA2E9PIF3 369 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 NPIPA3F8WFD2 350 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 MKRN2OSH3BPM6 223 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 MATN2O00339 956 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 PSIP1O75475 530 aaKnown RBP6.82□□□□□ -1.32
MSH6-209ENST00000538136 OR12D1P0DN82 309 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 HOXD12P35452 270 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 MAGEA3P43357 314 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 ACADVLP49748 655 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 MCEMP1Q8IX19 187 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 TTLQ8NG68 377 aa6.82□□□□□ -1.32
MSH6-209ENST00000538136 OR2L5Q8NG80 312 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms