RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MCIDASD6RGH6 385 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CDC40O60508 579 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 FARS2O95363 451 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ESR1P03372 595 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PTPN6P29350 595 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RPL9P32969 192 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GGT2P36268 569 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 MICAQ29983 383 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 B3GNTL1Q67FW5 361 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 KCTD11Q693B1 232 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 LRRC52Q8N7C0 313 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZSCAN1Q8NBB4 408 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF548Q8NEK5 533 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 OR2T35Q8NGX2 323 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 HERVK_113Q902F9 699 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ARMC5Q96C12 935 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RHBDF1Q96CC6 855 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PDLIM5Q96HC4 596 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CDKN2AIPNLQ96HQ2 116 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PFDN5Q99471 154 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 OSGEPL1Q9H4B0 414 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZFYVE1Q9HBF4 777 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CYTH4Q9UIA0 394 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 HRH3Q9Y5N1 445 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 A0A1W2PQH9 124 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CD8B2A6NJW9 211 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 UPK1AO00322 258 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ARHGAP33O14559 1287 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CASC3O15234 703 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TREHO43280 583 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PRH1P02810 166 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 IFNA6P05013 189 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CD8BP10966 210 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ACPPP15309 386 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GALP22466 123 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 S100PP25815 95 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CLCNKAP51800 687 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SPRYD7Q5W111 196 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SERPINA11Q86U17 422 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CFAP52Q8N1V2 620 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM86AQ8N2M4 240 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 FAM46DQ8NEK8 389 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RPLP0P6Q8NHW5 317 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 C1orf216Q8TAB5 229 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 NETO1Q8TDF5 533 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 KIAA1191Q96A73 305 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 MYO19Q96H55 970 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ARRDC5A6NEK1 342 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ANXA2P2A6NMY6 339 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 WASHC1A8K0Z3 465 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TRIM77I1YAP6 450 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ANXA2P07355 339 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PTPRAP18433 802 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SOX3P41225 446 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RPIAP49247 311 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SCGB2B2Q4G0G5 96 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 XKR7Q5GH72 579 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CRB2Q5IJ48 1285 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RAB11FIP2Q7L804 512 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF627Q7L945 461 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PSMG2Q969U7 264 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 P2RY13Q9BPV8 354 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TTTY10Q9BZA0 68 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ARNT2Q9HBZ2 717 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PIGVQ9NUD9 493 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 IKZF2Q9UKS7 526 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ABHD14A-ACY1A0A1B0GW23 586 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SPDEFO95238 335 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SRPRAP08240 638 aaKnown RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 HPGDP15428 266 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ARSBP15848 533 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ARF4P18085 180 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ULK3Q6PHR2 472 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 C19orf48Q6RUI8 117 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 FRRS1Q6ZNA5 592 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 RNF113BQ8IZP6 322 aaKnown RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SLAIN1Q8ND83 568 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SLC22A8Q8TCC7 542 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ST8SIA4Q92187 359 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ELMOD3Q96FG2 381 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 FBXO44Q9H4M3 255 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 C8orf33Q9H7E9 229 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 FBXW11Q9UKB1 542 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 FBXL3Q9UKT7 428 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 A0A096LPI6 279 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 A0A1W2PPL8 197 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 RLN2P04090 185 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 ALDOBP05062 364 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SCG5P05408 212 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 SAGP10523 405 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 CHMP24386 653 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 HRH2P25021 359 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 MAPK3P27361 379 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 GPR85P60893 370 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 GK2Q14410 553 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-213ENST00000537002 PTPRCAPQ14761 206 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 AANATQ16613 207 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 DUSP6Q16828 381 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 DENND1CQ8IV53 801 aa5.17□□□□□ -1.58
PTPRD-213ENST00000537002 NAXDQ8IW45 347 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms