RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 GPR143P51810 404 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TRAF3Q13114 568 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TERF2Q15554 542 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CLNKQ7Z7G1 428 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RPS19BP1Q86WX3 136 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 L3MBTL4Q8NA19 623 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MDS2Q8NDY4 140 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 B3GNT7Q8NFL0 401 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SUN3Q8TAQ9 357 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CDK15Q96Q40 435 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MTERF1Q99551 399 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SORBS1Q9BX66 1292 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PNO1Q9NRX1 252 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OLAHQ9NV23 265 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF223Q9UK11 482 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PPIEQ9UNP9 301 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RNF11Q9Y3C5 154 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PCDHGA11Q9Y5H2 935 aa16.68■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CROCCQ5TZA2 2017 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 H3BQF6 201 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NPHS1O60500 1241 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SERPINB5P36952 375 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TDGF1P3P51864 188 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PKNOX1P55347 436 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RPS13P62277 151 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ELOAQ14241 798 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RCN2Q14257 317 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CHI3L2Q15782 390 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CPSF6Q16630 551 aaKnown RBP eCLIP16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 AP5B1Q2VPB7 878 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF766Q5HY98 468 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF468Q5VIY5 522 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZCCHC23Q6ZST2 131 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 GPRIN3Q6ZVF9 776 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR4F6Q8NGB9 312 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 WDR20Q8TBZ3 569 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 REPS1Q96D71 796 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 UTP23Q9BRU9 249 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PRM3Q9NNZ6 103 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ABI3Q9P2A4 366 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ERRFI1Q9UJM3 462 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PCDHGB6Q9Y5F9 930 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NAV2Q8IVL1 2488 aa16.67■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CYSRT1A8MQ03 144 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PPP6CO00743 305 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PLPP1O14494 284 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CTNSO60931 367 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RASAL1O95294 804 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SERPINE1P05121 402 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 GRK2P25098 689 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SSR2P43308 183 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MLF1P58340 268 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SRSF11Q05519 484 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR1C1Q15619 314 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 GGTA1PQ4G0N0 100 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SPINK14Q6IE38 97 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR4C11Q6IEV9 310 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TRIM42Q8IWZ5 723 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ARMC10Q8N2F6 343 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SSC4DQ8WTU2 575 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NR4A3Q92570 626 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF717Q9BY31 904 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 HES7Q9BYE0 225 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 EML4Q9HC35 981 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MID1IP1Q9NPA3 183 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ADAP2Q9NPF8 381 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TRPS1Q9UHF7 1281 aa16.66■□□□□ 0.26
TNFRSF1A-209ENST00000536717 MYOCOSA0A1B0GUC4 107 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 LDB3O75112 727 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NEURL1O76050 574 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ETHE1O95571 254 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ESRRBO95718 433 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CHN1P15882 459 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 BGNP21810 368 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CLCN2P51788 898 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 PMP22Q01453 160 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 GALNT1Q10472 559 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 LETMD1Q6P1Q0 360 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ARFGAP2Q8N6H7 521 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 AGAP11Q8TF27 550 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 DYDC1Q8WWB3 177 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NCLNQ969V3 563 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 RGMAQ96B86 450 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 SCMH1Q96GD3 660 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ALOXE3Q9BYJ1 711 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 INTS9Q9NV88 658 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 VTI1BQ9UEU0 232 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 FBXW2Q9UKT8 454 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TRBV11-1A0A0K0K1C0 115 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 A0A1B0GTL3 188 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR4F21O95013 312 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ENO1P06733 434 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 NEK2P51955 445 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZRSR2Q15696 482 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ELAVL1Q15717 326 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 TTC19Q6DKK2 380 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 ZNF227Q86WZ6 799 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 CDYL2Q8N8U2 506 aa16.65■□□□□ 0.26
TNFRSF1A-209ENST00000536717 OR6Y1Q8NGX8 325 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms