RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM86B1Q8N7N1 296 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 TTC29Q8NA56 475 aaPredicted RBP11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 LPCAT1Q8NF37 534 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 NDNFQ8TB73 568 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 TESCQ96BS2 214 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 PITX2Q99697 317 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 TBCDQ9BTW9 1192 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 CD244Q9BZW8 370 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 RDH14Q9HBH5 336 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 IL1RAPQ9NPH3 570 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 WWOXQ9NZC7 414 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 KLQ9UEF7 1012 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 FKBPLQ9UIM3 349 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 NDRG4Q9ULP0 352 aaKnown RBP11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 MAPRE3Q9UPY8 281 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 CA5BQ9Y2D0 317 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 CACNA1GO43497 2377 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 APC2O95996 2303 aa11.1□□□□□ -0.63
CHRNB1-202ENST00000536404 PDZK1P1A8MUH7 402 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 ANKRD66B4E2M5 251 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 MANBAO00462 879 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 ARHGEF9O43307 516 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PRMT3O60678 531 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 MED26O95402 600 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 DLGAP3O95886 979 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 FABP3P05413 133 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CTSLP07711 333 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 EPB42P16452 691 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CD36P16671 472 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CR2P20023 1033 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 TAS2R38P59533 333 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF33BQ06732 778 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 MAD2L1BPQ15013 274 aaPredicted RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 TOR1AIP1Q5JTV8 583 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SPANXN4Q5MJ08 99 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 MLIPQ5VWP3 458 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PNCKQ6P2M8 343 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 LINGO4Q6UY18 593 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 RBFAQ8N0V3 343 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CHST14Q8NCH0 376 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 OR7D4Q8NG98 312 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CNIH3Q8TBE1 160 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SAP25Q8TEE9 199 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PIK3R3Q92569 461 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SGCDQ92629 289 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 KLK6Q92876 244 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 USP7Q93009 1102 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 ARRDC3Q96B67 414 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CDK15Q96Q40 435 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 TM9SF2Q99805 663 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 EGFL8Q99944 293 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SLIRPQ9GZT3 109 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 IFT22Q9H7X7 185 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 REEP1Q9H902 201 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SARS2Q9NP81 518 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PLCXD1Q9NUJ7 323 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SLC25A37Q9NYZ2 338 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 KLHL42Q9P2K6 505 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 ZNF490Q9ULM2 529 aaPredicted RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SNX7Q9UNH6 387 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SNX6Q9UNH7 406 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PCDHB14Q9Y5E9 798 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 RAI2Q9Y5P3 530 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 KNTC1P50748 2209 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 ACACAQ13085 2346 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 OR2A25A4D2G3 310 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 C1QTNF3-AMACRE9PGA6 284 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 NPIPB8E9PQR5 432 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 hCG_2039718K7EN88 272 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SULT1B1O43704 296 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 XPNPEP2O43895 674 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 NOS1APO75052 506 aaPredicted RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SNX4O95219 450 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 MT-ND2P03891 347 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 S100A6P06703 90 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CBSLP0DN79 551 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PPIBP23284 216 aaKnown RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PRPH2P23942 346 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CBSP35520 551 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 TALDO1P37837 337 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 GZMMP51124 257 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 VBP1P61758 197 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PRKCDQ05655 676 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 PIGFQ07326 219 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 LAPTM5Q13571 262 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 GTF2H3Q13889 308 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 INO80DQ53TQ3 878 aaPredicted RBP11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 FBXO48Q5FWF7 155 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 FAM219BQ5XKK7 198 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SBSNQ6UWP8 590 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 DHRS13Q6UX07 377 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 P3H2Q8IVL5 708 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
CHRNB1-202ENST00000536404 SAMD14Q8IZD0 417 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms