RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 C17orf105B2RV13 164 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 GOLGA8KD6RF30 607 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 C16orf97H3BN30 126 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 GOLGA8TH3BQL2 631 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 PJA2O43164 708 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 PSMD3O43242 534 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ZBTB14O43829 449 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ETHE1O95571 254 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 GAS8O95995 478 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ESR1P03372 595 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 THBS1P07996 1170 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 POU2F1P14859 743 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ARNTP27540 789 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 CDKN1AP38936 164 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 SCTRP47872 440 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 CCR8P51685 355 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 CLCN7P51798 805 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 MTTPP55157 894 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 CASP9P55211 416 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 BTN3A2P78410 334 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 SRYQ05066 204 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 TBL3Q12788 808 aaKnown RBP7.52□□□□□ -1.21
CLIP1-206ENST00000535290 GAB1Q13480 694 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 STX1AQ16623 288 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 FAM174BQ3ZCQ3 159 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 BEX5Q5H9J7 111 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 BICRALQ6AI39 1079 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 VWA1Q6PCB0 445 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 AGTRAPQ6RW13 159 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 SASS6Q6UVJ0 657 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 STRA8Q7Z7C7 330 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ANKRD53Q8N9V6 530 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 FAM47BQ8NA70 645 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 OR8K1Q8NGG5 319 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 OR14A16Q8NHC5 309 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 GABPB2Q8TAK5 448 aaPredicted RBP7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF721Q8TF20 911 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 AKAP1Q92667 903 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLIP1-206ENST00000535290 PEX13Q92968 403 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ZNF597Q96LX8 424 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 TNFRSF13CQ96RJ3 184 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 SGPP1Q9BX95 441 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ALOXE3Q9BYJ1 711 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 OPN3Q9H1Y3 402 aaPredicted RBP7.52□□□□□ -1.21
CLIP1-206ENST00000535290 EIF2B3Q9NR50 452 aaKnown RBP7.52□□□□□ -1.21
CLIP1-206ENST00000535290 TREX1Q9NSU2 369 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 CLCF1Q9UBD9 225 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 VTI1BQ9UEU0 232 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 ZFP69BQ9UJL9 534 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 LIPT1Q9Y234 373 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 MED16Q9Y2X0 877 aa7.52□□□□□ -1.21
CLIP1-206ENST00000535290 FRG2CA6NGY1 282 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 H3BMM5 538 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 CYR61O00622 381 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 TGM6O95932 706 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 GYPCP04921 128 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 F7P08709 466 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 CPN1P15169 458 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 TNNI3P19429 210 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 IGFBP5P24593 272 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 NMBRP28336 390 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 RPL22P35268 128 aaKnown RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 RAB38P57729 211 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 EEF1A1P68104 462 aaKnown RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 CRADDP78560 199 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 VLDLRP98155 873 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 TOMM20Q15388 145 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 BBS9Q3SYG4 887 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 EEF1A1P5Q5VTE0 462 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 AADACL2Q6P093 401 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 LCTLQ6UWM7 567 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 TMEM64Q6YI46 380 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 PPP1R21Q6ZMI0 780 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 UBE2R2Q712K3 238 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 PIWIL4Q7Z3Z4 852 aaKnown RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 YRDCQ86U90 279 aaKnown RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 C9orf40Q8IXQ3 194 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 DEPDC4Q8N2C3 294 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 OTUD6BQ8N6M0 293 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 SGMS2Q8NHU3 365 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 NUBPLQ8TB37 319 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 ATL1Q8WXF7 558 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 GTPBP3Q969Y2 492 aaKnown RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 PYCR2Q96C36 320 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 RUNDC3BQ96NL0 473 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 OR4K3Q96R72 315 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 CSF3RQ99062 836 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 TMEM204Q9BSN7 226 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 OSBPL8Q9BZF1 889 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 ACBD3Q9H3P7 528 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 GDF2Q9UK05 429 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-206ENST00000535290 ADAMTS6Q9UKP5 1117 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 MAPRE3Q9UPY8 281 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 C15orf41Q9Y2V0 281 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 IKBKGQ9Y6K9 419 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 NBEAL2Q6ZNJ1 2754 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 MED12LQ86YW9 2145 aa7.51□□□□□ -1.21
CLIP1-206ENST00000535290 MALRD1Q5VYJ5 2156 aa7.5□□□□□ -1.21
CLIP1-206ENST00000535290 FAM234BA2RU67 622 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms