RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 PENKP01210 267 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 PBX2P40425 430 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 NSDHLQ15738 373 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 NADSYN1Q6IA69 706 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 CENPSQ8N2Z9 138 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 FAM156AQ8NDB6 213 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 OR6N1Q8NGY5 312 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 CPNE2Q96FN4 548 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 LRCH3Q96II8 777 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 METTL2AQ96IZ6 378 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 IL17FQ96PD4 163 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 RBP7Q96R05 134 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 C1QTNF1Q9BXJ1 281 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TMEM9Q9P0T7 183 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 FABP12A6NFH5 140 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TCEA1P23193 301 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 DNASE1L1P49184 302 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 PPP3R1P63098 170 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 FOXK1P85037 733 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 REEP3Q6NUK4 255 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 GPR26Q8NDV2 337 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 GAL3ST3Q96A11 431 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ZSWIM3Q96MP5 696 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 FCRL3Q96P31 734 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 DSN1Q9H410 356 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 GAREM1Q9H706 876 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ACSS2Q9NR19 701 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 MARCH4Q9P2E8 410 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 STOX2Q9P2F5 926 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 WNT16Q9UBV4 365 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 NUP50Q9UKX7 468 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TBC1D24Q9ULP9 559 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 SPO11Q9Y5K1 396 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 A0A1W2PP18 115 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 SH3PXD2BA1X283 911 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF860A6NHJ4 632 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 OR6C70A6NIJ9 312 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 NUAK1O60285 661 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 BCHEP06276 602 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 H1F0P07305 194 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 PABPC4LP0CB38 370 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ACVR2AP27037 513 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 NKX3-2P78367 333 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 PLP2Q04941 152 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 FLYWCH1Q4VC44 716 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 PACRGLQ8N7B6 248 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 MFSD2AQ8NA29 543 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 OR4C15Q8NGM1 316 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TNFAIP8L1Q8WVP5 186 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 RNF31Q96EP0 1072 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 UHRF1Q96T88 793 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ASB6Q9NWX5 421 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 EMC3Q9P0I2 261 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 EDIL3O43854 480 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 PRAMEF2O60811 474 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 POU2F2P09086 479 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ARSDP51689 593 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 LASP1Q14847 261 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 KLHL22Q53GT1 634 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 LRIF1Q5T3J3 769 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TMEM214Q6NUQ4 689 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TMEM53Q6P2H8 277 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 CCDC28AQ8IWP9 274 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 KLHDC8AQ8IYD2 350 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 METTL27Q8N6F8 245 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ZUFSPQ96AP4 578 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TCTN2Q96GX1 697 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TRNT1Q96Q11 434 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 MYADMQ96S97 322 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 YIPF4Q9BSR8 244 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 TRIM2Q9C040 744 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 BHLHE41Q9C0J9 482 aaPredicted RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 ANKRA2Q9H9E1 313 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 CCL26Q9Y258 94 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 MAN2B2Q9Y2E5 1009 aa10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 RBM7Q9Y580 266 aaKnown RBP10.78□□□□□ -0.68
AMBRA1-211ENST00000533727 PPM1BO75688 479 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF3P17036 446 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 BMP8BP34820 402 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 ZNF140P52738 457 aaPredicted RBP10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 RCAN2Q14206 197 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 XKR5Q6UX68 686 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 BMP8AQ7Z5Y6 402 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 PHC2Q8IXK0 858 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 OR5K1Q8NHB7 308 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 LINC01599Q8WXQ3 324 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 PKP4Q99569 1192 aa10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 POLR2J3Q9H1A7 115 aaKnown RBP10.77□□□□□ -0.68
AMBRA1-211ENST00000533727 CXorf51AA0A1B0GTR3 108 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 A8MVJ9 347 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 TACSTD2P09758 323 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 CKMT2P17540 419 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 EFNA1P20827 205 aaPredicted RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 CD68P34810 354 aaPredicted RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 ALDH3A2P51648 485 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 AP3S2P59780 193 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 SMCO1Q147U7 214 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 GTF2IRD2BQ6EKJ0 949 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 FBXO42Q6P3S6 717 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 GTF2IRD2Q86UP8 949 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms