RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 TACR1P25103 407 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 CXCR5P32302 372 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 MAGEA6P43360 314 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 ASCL1P50553 236 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 HK2P52789 917 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 TGM3Q08188 693 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 CRYMQ14894 314 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 EFTUD2Q15029 972 aaKnown RBP eCLIP8.34□□□□□ -1.07
BEST3-207ENST00000533674 RTL6Q6ICC9 239 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 PAMR1Q6UXH9 720 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 TMEM139Q8IV31 216 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.34□□□□□ -1.07
BEST3-207ENST00000533674 KLHDC8AQ8IYD2 350 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 KRT78Q8N1N4 520 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 FBXW8Q8N3Y1 598 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 SPC24Q8NBT2 197 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 SLC22A8Q8TCC7 542 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 FAM222BQ8WU58 562 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 C18orf12Q96KH6 178 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 SGCZQ96LD1 299 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 YIPF4Q9BSR8 244 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 ALOXE3Q9BYJ1 711 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 LZTFL1Q9NQ48 299 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 TUBA8Q9NY65 449 aaPredicted RBP8.34□□□□□ -1.07
BEST3-207ENST00000533674 PPIEQ9UNP9 301 aaKnown RBP8.34□□□□□ -1.07
BEST3-207ENST00000533674 SLC22A14Q9Y267 594 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 SPACA6W5XKT8 324 aa8.34□□□□□ -1.07
BEST3-207ENST00000533674 C15orf38-AP3S2A0A0A6YYH1 394 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 NPEPPSL1A6NEC2 478 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 TUBAL3A6NHL2 446 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 TTC4O95801 387 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 CCDC175P0C221 793 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 SMIM10L1P0DMW3 83 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 CCL3P10147 92 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 CERS1P27544 350 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 GSTM2P28161 218 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 HNRNPH1P31943 449 aaKnown RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 PIGAP37287 484 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 GATA4P43694 442 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 TRPC1P48995 793 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 HNRNPFP52597 415 aaKnown RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 MTTPP55157 894 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 RNF4P78317 190 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 TBL3Q12788 808 aaKnown RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 ASPHQ12797 758 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 RUNX2Q13950 521 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 SERTAD2Q14140 314 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 SLBPQ14493 270 aaKnown RBP eCLIP8.33□□□□□ -1.08
BEST3-207ENST00000533674 PCBP2Q15366 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
BEST3-207ENST00000533674 SF3B4Q15427 424 aaKnown RBP eCLIP8.33□□□□□ -1.08
BEST3-207ENST00000533674 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 PRAMEF20Q5VT98 475 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 SLC22A10Q63ZE4 541 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 FAM45BPQ6NSW5 357 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 CLEC9AQ6UXN8 241 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 TMIGD1Q6UXZ0 262 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 KIF18BQ86Y91 864 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 INTS1Q8N201 2190 aaKnown RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 TMEM52Q8NDY8 209 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 FAM13CQ8NE31 585 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 WFDC11Q8NEX6 87 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 FAM45AQ8TCE6 357 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 SLC2A12Q8TD20 617 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 RNASE6Q93091 150 aaKnown RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 MAGOHBQ96A72 148 aaKnown RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 KIAA1191Q96A73 305 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 MBD6Q96DN6 1003 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 MS4A6EQ96DS6 147 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 SMIM10Q96HG1 83 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 CAPZA3Q96KX2 299 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 SERINC2Q96SA4 455 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 REXO4Q9GZR2 422 aaKnown RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 DLL4Q9NR61 685 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 CBLCQ9ULV8 474 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 RPH3AQ9Y2J0 694 aaPredicted RBP8.33□□□□□ -1.08
BEST3-207ENST00000533674 ATG4BQ9Y4P1 393 aa8.33□□□□□ -1.08
BEST3-207ENST00000533674 DNHD1Q96M86 4753 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 CTAGE15A4D2H0 777 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 LRIT2A6NDA9 550 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 NCF1BA6NI72 391 aaPredicted RBP8.32□□□□□ -1.08
BEST3-207ENST00000533674 NCF1CA8MVU1 366 aaPredicted RBP8.32□□□□□ -1.08
BEST3-207ENST00000533674 FAM171A2A8MVW0 826 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 EEF1E1-BLOC1S5C9J1V9 151 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 SYT5O00445 386 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 EEF1E1O43324 174 aaKnown RBP8.32□□□□□ -1.08
BEST3-207ENST00000533674 CTNSO60931 367 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 LDB3O75112 727 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 ATE1O95260 518 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 AHSGP02765 367 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 INHBBP09529 407 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 C1GALT1C1LP0DN25 315 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 NCF1P14598 390 aaPredicted RBP8.32□□□□□ -1.08
BEST3-207ENST00000533674 GDF1P27539 372 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 MSH2P43246 934 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 HNMTP50135 292 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 LIM2P55344 173 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 TIAL1Q01085 375 aaKnown RBP eCLIP8.32□□□□□ -1.08
BEST3-207ENST00000533674 PPP1R7Q15435 360 aa8.32□□□□□ -1.08
BEST3-207ENST00000533674 SPANXN3Q5MJ09 141 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms