RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 MSL3P1P0C860 447 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 C8orf89P0DMQ9 161 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 ZNF10P21506 573 aaPredicted RBP20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 ID4P47928 161 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 GSK3BP49841 420 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 TNFRSF17Q02223 184 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 C1orf146Q5VVC0 180 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 CYB5D1Q6P9G0 228 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 B3GNT8Q7Z7M8 397 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 METTL27Q8N6F8 245 aaPredicted RBP20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 ZNF583Q96ND8 569 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 GBP5Q96PP8 586 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 THUMPD3Q9BV44 507 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 FGF21Q9NSA1 209 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 L3MBTL1Q9Y468 752 aa20.7■□□□□ 0.9
PACSIN3-209ENST00000532457 TMX2-CTNND1H3BSU7 103 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 PDPK1O15530 556 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 DNAJA2O60884 412 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 ERAL1O75616 437 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 NR2F6P10588 404 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 PTGER1P34995 402 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 SOX11P35716 441 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 GZMMP51124 257 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 FAM53BQ14153 422 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 GARNL3Q5VVW2 1013 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 FBXW10Q5XX13 1052 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 IFNEQ86WN2 208 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 ADAMTS14Q8WXS8 1223 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 RNF31Q96EP0 1072 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 ZNF681Q96N22 645 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 PHF11Q9UIL8 331 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 HYAL3O43820 417 aaPredicted RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 CIB2O75838 187 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 ZCCHC18P0CG32 403 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 HSD17B1P14061 328 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 FEN1P39748 380 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 MAT1AQ00266 395 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 CCNIQ14094 377 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 TRIM25Q14258 630 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 GRM7Q14831 915 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 NDUFA9Q16795 377 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 SYT16Q17RD7 645 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 TMTC4Q5T4D3 741 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 TMPRSS12Q86WS5 348 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 OR4N5Q8IXE1 308 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 GALNT15Q8N3T1 639 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 SUN3Q8TAQ9 357 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 DEPDC7Q96QD5 511 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 NPLQ9BXD5 320 aaPredicted RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 TMEM121BQ9BXQ6 578 aaPredicted RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 GLIPR2Q9H4G4 154 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 RPF2Q9H7B2 306 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 CXorf36Q9H7Y0 433 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 KAT8Q9H7Z6 458 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 TAS2R9Q9NYW1 312 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 CLCA2Q9UQC9 943 aa20.69■□□□□ 0.9
PACSIN3-209ENST00000532457 SPTBN4Q9H254 2564 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 MYO1GB0I1T2 1018 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 CLIC1O00299 241 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 ZNF749O43361 778 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 MT-CO3P00414 261 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 MANFP55145 182 aaKnown RBP20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 EEFSECP57772 596 aaKnown RBP20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 OR4D2P58180 307 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 ACTR3P61158 418 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 SHC2P98077 582 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 TRA2AQ13595 282 aaKnown RBP eCLIP20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 HES3Q5TGS1 186 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 CDCP2Q5VXM1 449 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 CCDC116Q8IYX3 515 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 OR10A6Q8NH74 314 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 ZFP90Q8TF47 636 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 OR5P2Q8WZ92 322 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 AMDHD1Q96NU7 426 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 ALG2Q9H553 416 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 SIRT3Q9NTG7 399 aaPredicted RBP20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 CUTCQ9NTM9 273 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 HCN3Q9P1Z3 774 aa20.68■□□□□ 0.9
PACSIN3-209ENST00000532457 C15orf38-AP3S2A0A0A6YYH1 394 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 NSA2O95478 260 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 EMP3P54852 163 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 ZFP36L1Q07352 338 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 GPR155Q7Z3F1 870 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 ARPINQ7Z6K5 226 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 CACTIN-AS1Q8N1I8 211 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 PNPT1Q8TCS8 783 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 GPATCH2Q9NW75 528 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 DHCR7Q9UBM7 475 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 EGFL7Q9UHF1 273 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 SERTAD3Q9UJW9 196 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 MYOCOSA0A1B0GUC4 107 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 SEC16AO15027 2179 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 NVLO15381 856 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 B4GALT2O60909 372 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 BUD31P41223 144 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 CDK9P50750 372 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 PDX1P52945 283 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 ITGA1P56199 1179 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 LRRC74AQ0VAA2 488 aa20.67■□□□□ 0.9
PACSIN3-209ENST00000532457 HSPB3Q12988 150 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms