RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CLDN1O95832 211 aa2.55□□□□□ -2
CD44-234ENST00000531873 KRT6BP04259 564 aa2.55□□□□□ -2
CD44-234ENST00000531873 HMBSP08397 361 aa2.55□□□□□ -2
CD44-234ENST00000531873 CEBPBP17676 345 aa2.55□□□□□ -2
CD44-234ENST00000531873 GIFP27352 417 aa2.55□□□□□ -2
CD44-234ENST00000531873 ALDH3B1P43353 468 aa2.55□□□□□ -2
CD44-234ENST00000531873 KRT6CP48668 564 aa2.55□□□□□ -2
CD44-234ENST00000531873 RPL27P61353 136 aaKnown RBP2.55□□□□□ -2
CD44-234ENST00000531873 MYBPC1Q00872 1141 aa2.55□□□□□ -2
CD44-234ENST00000531873 ELP6Q0PNE2 266 aa2.55□□□□□ -2
CD44-234ENST00000531873 PDZK1IP1Q13113 114 aa2.55□□□□□ -2
CD44-234ENST00000531873 RIGQ13278 110 aa2.55□□□□□ -2
CD44-234ENST00000531873 SCGB2A2Q13296 93 aa2.55□□□□□ -2
CD44-234ENST00000531873 SNX1Q13596 522 aa2.55□□□□□ -2
CD44-234ENST00000531873 KLF5Q13887 457 aaPredicted RBP2.55□□□□□ -2
CD44-234ENST00000531873 NCAPD2Q15021 1401 aa2.55□□□□□ -2
CD44-234ENST00000531873 ZSWIM7Q19AV6 140 aa2.55□□□□□ -2
CD44-234ENST00000531873 ADAMTSL4-AS1Q5T5F5 129 aa2.55□□□□□ -2
CD44-234ENST00000531873 IL23RQ5VWK5 629 aa2.55□□□□□ -2
CD44-234ENST00000531873 CES4AQ5XG92 561 aa2.55□□□□□ -2
CD44-234ENST00000531873 HIST2H2AA3Q6FI13 130 aa2.55□□□□□ -2
CD44-234ENST00000531873 RTL6Q6ICC9 239 aa2.55□□□□□ -2
CD44-234ENST00000531873 SLC25A24Q6NUK1 477 aa2.55□□□□□ -2
CD44-234ENST00000531873 NEPROQ6NW34 567 aa2.55□□□□□ -2
CD44-234ENST00000531873 ARSKQ6UWY0 536 aa2.55□□□□□ -2
CD44-234ENST00000531873 OLFM4Q6UX06 510 aa2.55□□□□□ -2
CD44-234ENST00000531873 Q6ZRG5 221 aa2.55□□□□□ -2
CD44-234ENST00000531873 RFPL4BQ6ZWI9 263 aa2.55□□□□□ -2
CD44-234ENST00000531873 NOTCH2NLQ7Z3S9 236 aa2.55□□□□□ -2
CD44-234ENST00000531873 HOGA1Q86XE5 327 aa2.55□□□□□ -2
CD44-234ENST00000531873 DCUN1D3Q8IWE4 304 aa2.55□□□□□ -2
CD44-234ENST00000531873 OR4N5Q8IXE1 308 aa2.55□□□□□ -2
CD44-234ENST00000531873 RELL2Q8NC24 303 aaPredicted RBP2.55□□□□□ -2
CD44-234ENST00000531873 OR5T2Q8NGG2 359 aa2.55□□□□□ -2
CD44-234ENST00000531873 OR5M9Q8NGP3 310 aa2.55□□□□□ -2
CD44-234ENST00000531873 OR6S1Q8NH40 331 aa2.55□□□□□ -2
CD44-234ENST00000531873 RPLP0P6Q8NHW5 317 aa2.55□□□□□ -2
CD44-234ENST00000531873 LIPHQ8WWY8 451 aa2.55□□□□□ -2
CD44-234ENST00000531873 PHYHIPQ92561 330 aa2.55□□□□□ -2
CD44-234ENST00000531873 PTPRUQ92729 1446 aa2.55□□□□□ -2
CD44-234ENST00000531873 MCHR2Q969V1 340 aa2.55□□□□□ -2
CD44-234ENST00000531873 MRPL24Q96A35 216 aaKnown RBP2.55□□□□□ -2
CD44-234ENST00000531873 TRIM44Q96DX7 344 aaPredicted RBP2.55□□□□□ -2
CD44-234ENST00000531873 COG3Q96JB2 828 aa2.55□□□□□ -2
CD44-234ENST00000531873 PGLYRP2Q96PD5 576 aa2.55□□□□□ -2
CD44-234ENST00000531873 DEFB118Q96PH6 123 aa2.55□□□□□ -2
CD44-234ENST00000531873 ACCSQ96QU6 501 aa2.55□□□□□ -2
CD44-234ENST00000531873 ZNF300Q96RE9 604 aaPredicted RBP2.55□□□□□ -2
CD44-234ENST00000531873 CTAGE1Q96RT6 745 aa2.55□□□□□ -2
CD44-234ENST00000531873 OVOL2Q9BRP0 275 aa2.55□□□□□ -2
CD44-234ENST00000531873 PINK1Q9BXM7 581 aa2.55□□□□□ -2
CD44-234ENST00000531873 RWDD1Q9H446 243 aaPredicted RBP2.55□□□□□ -2
CD44-234ENST00000531873 HPS4Q9NQG7 708 aa2.55□□□□□ -2
CD44-234ENST00000531873 LHX3Q9UBR4 397 aa2.55□□□□□ -2
CD44-234ENST00000531873 MIOXQ9UGB7 285 aa2.55□□□□□ -2
CD44-234ENST00000531873 RNF115Q9Y4L5 304 aa2.55□□□□□ -2
CD44-234ENST00000531873 KIF26BQ2KJY2 2108 aa2.54□□□□□ -2
CD44-234ENST00000531873 KIF7Q2M1P5 1343 aa2.54□□□□□ -2
CD44-234ENST00000531873 RNF123Q5XPI4 1314 aa2.54□□□□□ -2
CD44-234ENST00000531873 A0A087WZY1 265 aa2.54□□□□□ -2
CD44-234ENST00000531873 IGHV3-20A0A0C4DH32 117 aa2.54□□□□□ -2
CD44-234ENST00000531873 FAM230AA0A1W2PPH8 454 aa2.54□□□□□ -2
CD44-234ENST00000531873 YJEFN3A6XGL0 299 aa2.54□□□□□ -2
CD44-234ENST00000531873 NOL3O60936 208 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 CSO75390 466 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 SCGB2A1O75556 95 aa2.54□□□□□ -2
CD44-234ENST00000531873 ANXA9O76027 345 aa2.54□□□□□ -2
CD44-234ENST00000531873 HPRP00739 348 aa2.54□□□□□ -2
CD44-234ENST00000531873 IGHEP01854 428 aa2.54□□□□□ -2
CD44-234ENST00000531873 RPLP0P05388 317 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 LYNP07948 512 aa2.54□□□□□ -2
CD44-234ENST00000531873 RALAP11233 206 aa2.54□□□□□ -2
CD44-234ENST00000531873 HLA-FP30511 346 aa2.54□□□□□ -2
CD44-234ENST00000531873 CHRNB4P30926 498 aa2.54□□□□□ -2
CD44-234ENST00000531873 MAT2AP31153 395 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 GPR183P32249 361 aa2.54□□□□□ -2
CD44-234ENST00000531873 MAGEA4P43358 317 aa2.54□□□□□ -2
CD44-234ENST00000531873 MTIF2P46199 727 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 TRPC1P48995 793 aa2.54□□□□□ -2
CD44-234ENST00000531873 NPY2RP49146 381 aa2.54□□□□□ -2
CD44-234ENST00000531873 DRP2Q13474 957 aa2.54□□□□□ -2
CD44-234ENST00000531873 ITPK1Q13572 414 aa2.54□□□□□ -2
CD44-234ENST00000531873 P2RY14Q15391 338 aa2.54□□□□□ -2
CD44-234ENST00000531873 ZKSCAN8Q15776 578 aaPredicted RBP2.54□□□□□ -2
CD44-234ENST00000531873 CLPPQ16740 277 aaPredicted RBP2.54□□□□□ -2
CD44-234ENST00000531873 HSP90AA5PQ58FG0 334 aa2.54□□□□□ -2
CD44-234ENST00000531873 RIPPLY2Q5TAB7 128 aa2.54□□□□□ -2
CD44-234ENST00000531873 KIAA1161Q6NSJ0 714 aa2.54□□□□□ -2
CD44-234ENST00000531873 PWWP2BQ6NUJ5 590 aa2.54□□□□□ -2
CD44-234ENST00000531873 BHLHB9Q6PI77 547 aa2.54□□□□□ -2
CD44-234ENST00000531873 AFTPHQ6ULP2 937 aa2.54□□□□□ -2
CD44-234ENST00000531873 FIP1L1Q6UN15 594 aaKnown RBP2.54□□□□□ -2
CD44-234ENST00000531873 ZNF730Q6ZMV8 503 aa2.54□□□□□ -2
CD44-234ENST00000531873 Q71RC1 249 aaPredicted RBP2.54□□□□□ -2
CD44-234ENST00000531873 ARMCX2Q7L311 632 aa2.54□□□□□ -2
CD44-234ENST00000531873 MCM10Q7L590 875 aa2.54□□□□□ -2
CD44-234ENST00000531873 LSMEM2Q8N112 164 aa2.54□□□□□ -2
CD44-234ENST00000531873 RAB42Q8N4Z0 105 aa2.54□□□□□ -2
CD44-234ENST00000531873 CERS5Q8N5B7 392 aa2.54□□□□□ -2
CD44-234ENST00000531873 COLGALT1Q8NBJ5 622 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms