RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	KCNK10	P57789	538 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867		Q0VFX4	171 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	CETN1	Q12798	172 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	LASP1	Q14847	261 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	NAA25	Q14CX7	972 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	IQCB1	Q15051	598 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	NCF4	Q15080	339 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	P3H1	Q32P28	736 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	ANKDD1A	Q495B1	522 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	ZNF789	Q5FWF6	425 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	RWDD4	Q6NW29	188 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	TTI2	Q6NXR4	508 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	CERS6	Q6ZMG9	384 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	RFLNA	Q6ZTI6	216 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	FAM92B	Q6ZTR7	304 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	MARK2	Q7KZI7	788 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	RAB43	Q86YS6	212 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	LINC00346	Q8IVM7	164 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	TUSC5	Q8IXB3	177 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	BCORP1	Q8N888	145 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	SIDT2	Q8NBJ9	832 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	CLEC1A	Q8NC01	280 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	DNAJB14	Q8TBM8	379 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	DUSP19	Q8WTR2	217 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	ZFAND2B	Q8WV99	257 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	SHC3	Q92529	594 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	NTAN1	Q96AB6	310 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	INTS12	Q96CB8	462 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	ARSG	Q96EG1	525 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	SCRN2	Q96FV2	425 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	PERP	Q96FX8	193 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	REXO5	Q96IC2	774 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	CFAP57	Q96MR6	1250 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	EIF3C	Q99613	913 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	ABCG8	Q9H221	673 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	KLK15	Q9H2R5	256 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	LRRC19	Q9H756	370 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	SLC40A1	Q9NP59	571 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	POT1	Q9NUX5	634 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	OLAH	Q9NV23	265 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	CWC15	Q9P013	229 aa	Known RBP	5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	DNAJB9	Q9UBS3	223 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	LIPT1	Q9Y234	373 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	KCNK6	Q9Y257	313 aa		5.4	□□□□□ -1.54
PUM1-222	ENST00000531867	RNF103-CHMP3	A0A140T963	221 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	LRRD1	A4D1F6	860 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867		A8MZ25	164 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	PRPF4	O43172	522 aa	Known RBP eCLIP	5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	SOCS5	O75159	536 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	CYP2A6	P11509	494 aa	Predicted RBP	5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	GPD1	P21695	349 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	CMA1	P23946	247 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	PCP4	P48539	62 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	UFM1	P61960	85 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	AP1S1	P61966	158 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	PPP1CA	P62136	330 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	CSNK1G2	P78368	415 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	LRRC63	Q05C16	580 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	TMEM115	Q12893	351 aa	Predicted RBP	5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	RPA4	Q13156	261 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	PCLAF	Q15004	111 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	CST9LP1	Q5W188	147 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	SFRP4	Q6FHJ7	346 aa	Predicted RBP	5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	WASH2P	Q6VEQ5	465 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	MSANTD1	Q6ZTZ1	278 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	OTOA	Q7RTW8	1153 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	KCTD20	Q7Z5Y7	419 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	ADCK1	Q86TW2	530 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	BIVM	Q86UB2	503 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	TRIM74	Q86UV6	250 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	TMEM126B	Q8IUX1	230 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	SPART	Q8N0X7	666 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	EXD1	Q8NHP7	514 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	PSMA8	Q8TAA3	256 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	NTN5	Q8WTR8	489 aa	Predicted RBP	5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	NR4A3	Q92570	626 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	SARAF	Q96BY9	339 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	AP2M1	Q96CW1	435 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	RBM18	Q96H35	190 aa	Known RBP	5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	VPS39	Q96JC1	886 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	FAM81B	Q96LP2	452 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	TAAR6	Q96RI8	345 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	WDR24	Q96S15	920 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	TMEM121	Q9BTD3	319 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	TUBB6	Q9BUF5	446 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	UBE2T	Q9NPD8	197 aa	Predicted RBP	5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	EHD3	Q9NZN3	535 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	RCOR1	Q9UKL0	485 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	BTRC	Q9Y297	605 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	HCFC1	P51610	2035 aa		5.39	□□□□□ -1.55
PUM1-222	ENST00000531867	LOC100509620	A0A075B734	347 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	TRGV8	A0A0C4DH27	118 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	TEX13C	A0A0J9YWL9	993 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	TLCD2	A6NGC4	264 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	TEX22	C9J3V5	150 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	CHUK	O15111	745 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	PALM	O75781	387 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	NXPH3	O95157	252 aa		5.38	□□□□□ -1.55
PUM1-222	ENST00000531867	ATP1A1	P05023	1023 aa	Known RBP	5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms