RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 MED13Q9UHV7 2174 aa4.89□□□□□ -1.63
AMBRA1-209ENST00000529963 SPG11Q96JI7 2443 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 MN1Q10571 1320 aaPredicted RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TRBV5-7A0A0A0MS05 114 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 A0A0U1RQS6 177 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 C1orf232A0A0U1RR37 186 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 GPR89AB7ZAQ6 455 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 AP3D1O14617 1153 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TOX3O15405 576 aaPredicted RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 GRID2O43424 1007 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 MFSD11O43934 449 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 MTA2O94776 668 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 NDUFB8O95169 186 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 CLDN7O95471 211 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 EML2O95834 649 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 DDAH2O95865 285 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 HLA-DQA2P01906 255 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 GPR89BP0CG08 455 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TCF4P15884 667 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 AMD1P17707 334 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 CCNCP24863 283 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 DLSTP36957 453 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 SSR1P43307 286 aaKnown RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 SPINT3P49223 89 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 CLCNKAP51800 687 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 GFERP55789 205 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 UBE2IP63279 158 aaKnown RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 IL11RAQ14626 422 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 INPP5JQ15735 1006 aaPredicted RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TBCEQ15813 527 aaPredicted RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 SYTL3Q4VX76 610 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TDRD12Q587J7 1177 aaKnown RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 HENMT1Q5T8I9 393 aaKnown RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 PXDC1Q5TGL8 231 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 AAGABQ6PD74 315 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC22A25Q6T423 547 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 CLEC17AQ6ZS10 378 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TRIM73Q86UV7 250 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 NIPA2Q8N8Q9 360 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 GPATCH11Q8N954 259 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 STAMBPL1Q96FJ0 436 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 C9orf72Q96LT7 481 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 MLPHQ9BV36 600 aaPredicted RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 SPATA16Q9BXB7 569 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 NPLQ9BXD5 320 aaPredicted RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TBC1D10AQ9BXI6 508 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 NAT10Q9H0A0 1025 aaKnown RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 ISCUQ9H1K1 167 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 OSGEPL1Q9H4B0 414 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 ACTR5Q9H9F9 607 aaPredicted RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 PCDH9Q9HC56 1237 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 ALKBH4Q9NXW9 302 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 ANAPC7Q9UJX3 599 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 CAMK2AQ9UQM7 478 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 TP53TG5Q9Y2B4 290 aa4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 ZFC3H1O60293 1989 aaKnown RBP4.88□□□□□ -1.63
AMBRA1-209ENST00000529963 SMTNL1A8MU46 457 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 PDZK1P1A8MUH7 402 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 KMOO15229 486 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC25A14O95258 325 aaPredicted RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 C9P02748 559 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 MT-ND3P03897 115 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF8P17098 575 aaPredicted RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 CASP14P31944 242 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 GJC1P36383 396 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ARL1P40616 181 aaPredicted RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 SKIV2L2P42285 1042 aaKnown RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 DCDC1P59894 354 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC25A11Q02978 314 aaKnown RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 PAFAH1B3Q15102 231 aaKnown RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 PDK2Q15119 407 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC18A3Q16572 532 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ODF3L2Q3SX64 289 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 CCDC183Q5T5S1 534 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ATP1A1-AS1Q5TC04 95 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 NCBP2-AS2Q69YL0 99 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 PDPK2PQ6A1A2 396 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 TXNRD3NBQ6F5E7 133 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 C11orf87Q6NUJ2 197 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 KLHL24Q6TFL4 600 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 TMEM26Q6ZUK4 368 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ASB18Q6ZVZ8 466 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 PXKQ7Z7A4 578 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ADGRG6Q86SQ4 1221 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 MAP7D3Q8IWC1 876 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 CCDC13Q8IYE1 715 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 GHDCQ8N2G8 530 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC25A41Q8N5S1 370 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 KCTD6Q8NC69 237 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ARRDC2Q8TBH0 407 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 FAR1Q8WVX9 515 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 MIB2Q96AX9 1013 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF830Q96NB3 372 aaPredicted RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 TGM7Q96PF1 710 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 TSGA13Q96PP4 275 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 SMIM14Q96QK8 99 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 OR6C1Q96RD1 312 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 CD180Q99467 661 aa4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 WDR83Q9BRX9 315 aaKnown RBP4.87□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF670Q9BS34 389 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms