RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 FRAT1Q92837 279 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 ZMYND19Q96E35 227 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 SMARCD1Q96GM5 515 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ATXN7L3BQ96GX2 97 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PPP1R16AQ96I34 528 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 GMPPAQ96IJ6 420 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 SERAC1Q96JX3 654 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 C18orf12Q96KH6 178 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 CCDC43Q96MW1 224 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 FOXN4Q96NZ1 517 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 NR1H4Q96RI1 486 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 GFI1Q99684 422 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 DDX50Q9BQ39 737 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 C17orf62Q9BQA9 187 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 EIF2AK1Q9BQI3 630 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 PSD2Q9BQI7 771 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TRIM62Q9BVG3 475 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 KIFC3Q9BVG8 833 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 BBS2Q9BXC9 721 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 GPR63Q9BZJ6 419 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 DNAI2Q9GZS0 605 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LRMDAQ9H2I8 198 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LINC00597Q9H2U6 94 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 UCK1Q9HA47 277 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PELI2Q9HAT8 420 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 SCPEP1Q9HB40 452 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 APOBEC3GQ9HC16 384 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 TRPC7Q9HCX4 862 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 DMAP1Q9NPF5 467 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 PRSS16Q9NQE7 514 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 AGPAT4Q9NRZ5 378 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 OLA1Q9NTK5 396 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 ATAD3AQ9NVI7 634 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 MPP6Q9NZW5 540 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LARSQ9P2J5 1176 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 WRAP73Q9P2S5 460 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 KCNN3Q9UGI6 736 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PILRAQ9UKJ1 303 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TNNQ9UQP3 1299 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 SCML2Q9UQR0 700 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 MRPS28Q9Y2Q9 187 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 HBS1LQ9Y450 684 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 CSAG2Q9Y5P2 127 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 DIDO1Q9BTC0 2240 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 TRRAPQ9Y4A5 3859 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 DENND4CQ5VZ89 1909 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PRKDCP78527 4128 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 A0A1W2PQ72 361 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ARHGEF35A5YM69 484 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ANKUB1A6NFN9 424 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TCP11X1B4DZS4 312 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 NEDD8-MDP1E9PL57 170 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 E9PQ18 207 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CYB561D2O14569 222 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 MCF2LO15068 1137 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CHMP2AO43633 222 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 VEGFDO43915 354 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 RAD1O60671 282 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 GCNT3O95395 438 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 MOCS3O95396 460 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 IGLV3-27P01718 113 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ALPPP05187 535 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 TFAP2AP05549 437 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 KRT19P08727 400 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 KRT7P08729 469 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 RAB40ALP0C0E4 278 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 MBL2P11226 248 aaPredicted RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 COX6B1P14854 86 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 NMT1P30419 496 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 HLA-FP30511 346 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 DRD3P35462 400 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 UGT1A3P35503 534 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ATP5C1P36542 298 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 CPOXP36551 454 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 NNMTP40261 264 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 HADHAP40939 763 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 GARSP41250 739 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 UQCRFS1P47985 274 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 MMP15P51511 669 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 BMXP51813 675 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 SMSP52788 366 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 THOP1P52888 689 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 LIMK2P53671 638 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 ST8SIA6P61647 398 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 RPS21P63220 83 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 RBP5P82980 135 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 GTF2BQ00403 316 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 OTUD4Q01804 1114 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 AKAP17AQ02040 695 aaKnown RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 AP1B1Q10567 949 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 FOXD4Q12950 439 aaPredicted RBP1.43□□□□□ -2.18
CD44-212ENST00000524922 TAF10Q12962 218 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 NECTIN1Q15223 517 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 CST6Q15828 149 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 IGFBP7Q16270 282 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 BAK1Q16611 211 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 XKR6Q5GH73 641 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 GLRA4Q5JXX5 417 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 FFAR4Q5NUL3 377 aa1.43□□□□□ -2.18
CD44-212ENST00000524922 DCAF12Q5T6F0 453 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms