RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	DCDC5	Q6ZRR9	648 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	TMPRSS11B	Q86T26	416 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MEX3D	Q86XN8	651 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	STH	Q8IWL8	128 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ARHGAP24	Q8N264	748 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	SAP25	Q8TEE9	199 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	LRR1	Q96L50	414 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ATP6V1G3	Q96LB4	118 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	COQ7	Q99807	217 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC2A11	Q9BYW1	496 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	CDT1	Q9H211	546 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	KCNN2	Q9H2S1	579 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	PNN	Q9H307	717 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	EXO5	Q9H790	373 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	TRPC7	Q9HCX4	862 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MLXIPL	Q9NP71	852 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MRPL17	Q9NRX2	175 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ANKRD10	Q9NXR5	420 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	BARHL2	Q9NY43	387 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ATXN10	Q9UBB4	475 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	NOCT	Q9UK39	431 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	KCNJ14	Q9UNX9	436 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	SH3GLB1	Q9Y371	365 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MRPS2	Q9Y399	296 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	NFE2L3	Q9Y4A8	694 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MTCH2	Q9Y6C9	303 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	RPAP1	Q9BWH6	1393 aa	Predicted RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MYO7A	Q13402	2215 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	CACNA1B	Q00975	2339 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A075B6Q4	140 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	TMEM129	A0AVI4	362 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC15A5	A6NIM6	579 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ASB14	A6NK59	587 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	PRSS46	E5RG02	174 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	TMEM189-UBE2V1	I3L0A0	370 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356		J3QR06	171 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	PSMD3	O43242	534 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	TSPAN1	O60635	241 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	STBD1	O95210	358 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	OR6A2	O95222	327 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	C9	P02748	559 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	UNG	P13051	313 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF18	P17022	549 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	MAOA	P21397	527 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	PAICS	P22234	425 aa	Known RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	PTBP1	P26599	531 aa	Known RBP eCLIP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	DCTD	P32321	178 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	OR1D2	P34982	312 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	CA8	P35219	290 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	EIF2S3	P41091	472 aa	Known RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	GPR12	P47775	334 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	CDX1	P47902	265 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	FMO5	P49326	533 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ALDH7A1	P49419	539 aa	Known RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SUCLG1	P53597	346 aa	Known RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	TIMM10	P62072	90 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	LTB	Q06643	244 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	HSPA14	Q0VDF9	509 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SRSF5	Q13243	272 aa	Known RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	UBE2V1	Q13404	147 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	CUL3	Q13618	768 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	PTGIS	Q16647	500 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	TPD52L1	Q16890	204 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SYT16	Q17RD7	645 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	MRGPRG-AS1	Q2M3A8	158 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SMTNL2	Q2TAL5	461 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ANKRD55	Q3KP44	614 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ODF3L2	Q3SX64	289 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	DCST1	Q5T197	706 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	METTL11B	Q5VVY1	283 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	MFSD14C	Q5VZR4	134 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	LCN10	Q6JVE6	187 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	TMPRSS11F	Q6ZWK6	438 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	TMCO2	Q7Z6W1	182 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SERPINA11	Q86U17	422 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ANKRD46	Q86W74	232 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	WDR49	Q8IV35	697 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SPATA6L	Q8N4H0	392 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	IQCF1	Q8N6M8	205 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC44A5	Q8NCS7	719 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	CMAS	Q8NFW8	434 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	OR52J3	Q8NH60	311 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	GOLGA5	Q8TBA6	731 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ACER1	Q8TDN7	264 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ATP8B4	Q8TF62	1192 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	STARD8	Q92502	1023 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	FCGR1B	Q92637	280 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	RASD2	Q96D21	266 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	P2RY11	Q96G91	374 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC41A3	Q96GZ6	507 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	GRAMD2B	Q96HH9	432 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	DHTKD1	Q96HY7	919 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF396	Q96N95	335 aa	Predicted RBP	3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF570	Q96NI8	536 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	SIKE1	Q9BRV8	207 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	FICD	Q9BVA6	458 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	LHPP	Q9H008	270 aa		3.97	□□□□□ -1.77
PCM1-223	ENST00000524356	DPEP3	Q9H4B8	488 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms