RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 TP63Q9H3D4 680 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 RPF2Q9H7B2 306 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 DMRT3Q9NQL9 472 aa8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 SNX15Q9NRS6 342 aa8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 SACM1LQ9NTJ5 587 aa8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 CPSF2Q9P2I0 782 aaKnown RBP8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 ZNF223Q9UK11 482 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 TSC22D4Q9Y3Q8 395 aa8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 ASB1Q9Y576 335 aa8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 CLDN16Q9Y5I7 305 aa8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 APCP25054 2843 aa8.23□□□□□ -1.09
CTNNA1-240ENST00000523912 IQANK1A0A1B0GTG1 560 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 ESYT3A0FGR9 886 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 FAM166BA8MTA8 275 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 H0YIV9 168 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 BCKDKO14874 412 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 LDB3O75112 727 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 KLHL2O95198 593 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 C1QAP02745 245 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 C2P06681 752 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 SNRPB2P08579 225 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 RBP1P09455 135 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 NR2F6P10588 404 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 ALOX15P16050 662 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 HK2P52789 917 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 ID2Q02363 134 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 GUCY2DQ02846 1103 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 DLG1Q12959 904 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 GTF2H2Q13888 395 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 PCBP2Q15366 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 WHAMMP3Q1A5X7 153 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 MPEG1Q2M385 716 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 CMPK2Q5EBM0 449 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 GTF2H2CQ6P1K8 395 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 CYP20A1Q6UW02 462 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 FAM47EQ6ZV65 393 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 ACAD11Q709F0 780 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 SLC29A4Q7RTT9 530 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 CENPLQ8N0S6 344 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 FAM109AQ8N4B1 249 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 MNS1Q8NEH6 495 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 OR2M7Q8NG81 312 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 C16orf52Q8NHV5 167 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 SDCCAG3Q96C92 435 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 NXNL1Q96CM4 212 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 FBXL20Q96IG2 436 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 MTERF1Q99551 399 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 CNPPD1Q9BV87 410 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 OR51B5Q9H339 312 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 ACSS3Q9H6R3 686 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 IL1RL2Q9HB29 575 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 B4GALT7Q9UBV7 327 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 CSMD1Q96PZ7 3565 aa8.22□□□□□ -1.09
CTNNA1-240ENST00000523912 CACNA1CQ13936 2221 aa8.21□□□□□ -1.09
CTNNA1-240ENST00000523912 ANKHD1Q8IWZ3 2542 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 OR14I1A6ND48 311 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 FAM47E-STBD1D6RA91 191 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 PLPP1O14494 284 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 FGF17O60258 216 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 PRKNO60260 465 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SMIM24O75264 130 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 KRT38O76015 456 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SEMA3DO95025 777 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 CLDN9O95484 217 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 CNTFP26441 200 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 CHRNB4P30926 498 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SERPINB9P50453 376 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 CCNG1P51959 295 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 RPS13P62277 151 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 IGLV3-21P80748 117 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 IRF9Q00978 393 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SLC7A5Q01650 507 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 FOLH1Q04609 750 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 IFT88Q13099 833 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 CUL3Q13618 768 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 CPSF6Q16630 551 aaKnown RBP eCLIP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 TTC19Q6DKK2 380 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 OR52E8Q6IFG1 317 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SPNS3Q6ZMD2 512 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 C3P1Q6ZMU1 363 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 RNF111Q6ZNA4 994 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 C16orf47Q6ZP98 133 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 PAGE2Q7Z2X7 111 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 GOLGA7Q7Z5G4 137 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 FGD2Q7Z6J4 655 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 CHERPQ8IWX8 916 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 ST13P4Q8IZP2 240 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 TAGAPQ8N103 731 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 C17orf53Q8N3J3 647 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SLC15A4Q8N697 577 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 PTGR2Q8N8N7 351 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 OR5M3Q8NGP4 307 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SREK1Q8WXA9 508 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 RND1Q92730 232 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 ANKRD9Q96BM1 317 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SENP5Q96HI0 755 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 SCYL1Q96KG9 808 aa8.21□□□□□ -1.1
CTNNA1-240ENST00000523912 GAL3ST4Q96RP7 486 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms