RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PCBP2Q15366 365 aaKnown RBP eCLIP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 GPR19Q15760 415 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MLF2Q15773 248 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PABPC1L2AQ5JQF8 200 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 IER5LQ5T953 404 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MEDAGQ5VYS4 303 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 C9orf57Q5W0N0 161 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ABLIM2Q6H8Q1 611 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 RGS7BPQ6MZT1 257 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 FBXO42Q6P3S6 717 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 VWA1Q6PCB0 445 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 LYPD8Q6UX82 237 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF438Q7Z4V0 828 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ARPINQ7Z6K5 226 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 RAB44Q7Z6P3 723 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TMEM86AQ8N2M4 240 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 KDM8Q8N371 416 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 LRRC52Q8N7C0 313 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 Q8N9G6 341 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 DTWD2Q8NBA8 298 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CAMKVQ8NCB2 501 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ACTL9Q8TC94 416 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ZFAND1Q8TCF1 268 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 SPPL2BQ8TCT7 592 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 HM13Q8TCT9 377 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 SFT2D1Q8WV19 159 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 SNAPC3Q92966 411 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 IRF7Q92985 503 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ZHX1-C8orf76Q96EF9 292 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 C14orf144Q96I85 54 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CAPZA3Q96KX2 299 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 KLHL15Q96M94 604 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 GAL3ST4Q96RP7 486 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 FIZ1Q96SL8 496 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 SORBS1Q9BX66 1292 aaKnown RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 BCO2Q9BYV7 579 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 METTL7AQ9H8H3 244 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TBC1D17Q9HA65 648 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PRMT8Q9NR22 394 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 GKN1Q9NS71 199 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ABCB8Q9NUT2 735 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MED9Q9NWA0 146 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 ZDHHC3Q9NYG2 299 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 GTSE1Q9NYZ3 720 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 DNMT3BQ9UBC3 853 aaKnown RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MGAT4CQ9UBM8 478 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 MLXQ9UH92 298 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CA5BQ9Y2D0 317 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 PCDHGA6Q9Y5G7 932 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 CLIC4Q9Y696 253 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 USP3Q9Y6I4 520 aa7.2□□□□□ -1.26
HDAC3-216ENST00000523088 RIF1Q5UIP0 2472 aaKnown RBP7.2□□□□□ -1.26
HDAC3-216ENST00000523088 TICRRQ7Z2Z1 1910 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ELOA3CA0A087WX78 387 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TRIM49BA6NDI0 452 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ELOA3DA6NLF2 546 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TRDCB7Z8K6 153 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 M0QYV0 167 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PIRO00625 290 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PRMT5O14744 637 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ADAM20O43506 726 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 NARSO43776 548 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 FADS1O60427 444 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 GFRA3O60609 400 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 RAD1O60671 282 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 SDC3O75056 442 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF780AO75290 641 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 KCNK5O95279 499 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PTTG1O95997 202 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ENO1P06733 434 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 EPHX1P07099 455 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 APRTP07741 180 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 SNRPB2P08579 225 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 MELTFP08582 738 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PEPDP12955 493 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF30P17039 623 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 BPIP17213 487 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 MPSTP25325 297 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 GJC1P36383 396 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TNFSF9P41273 254 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 PRKCIP41743 596 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 DGKEP52429 567 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ARPP19P56211 112 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 LSM11P83369 360 aaKnown RBP eCLIP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 SORDQ00796 357 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 SCN1BQ07699 218 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TWF1Q12792 350 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TRIP10Q15642 601 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 FAM189A2Q15884 450 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 MICBQ29980 383 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF528Q3MIS6 628 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 HSF5Q4G112 596 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 KHDC1Q4VXA5 237 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 TEX44Q53QW1 395 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 ARHGAP15Q53QZ3 475 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 RNASE10Q5GAN6 216 aaKnown RBP7.19□□□□□ -1.26
HDAC3-216ENST00000523088 BEX5Q5H9J7 111 aa7.19□□□□□ -1.26
HDAC3-216ENST00000523088 NHSL2Q5HYW2 709 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms