RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 TRIM54Q9BYV2 358 aa5.8□□□□□ -1.48
PABPC1-220ENST00000522658 DEFB127Q9H1M4 99 aa5.8□□□□□ -1.48
PABPC1-220ENST00000522658 PNO1Q9NRX1 252 aaKnown RBP5.8□□□□□ -1.48
PABPC1-220ENST00000522658 SYBUQ9NX95 663 aa5.8□□□□□ -1.48
PABPC1-220ENST00000522658 MTRF1LQ9UGC7 380 aaKnown RBP5.8□□□□□ -1.48
PABPC1-220ENST00000522658 ASB1Q9Y576 335 aa5.8□□□□□ -1.48
PABPC1-220ENST00000522658 SLC22A7Q9Y694 548 aa5.8□□□□□ -1.48
PABPC1-220ENST00000522658 CACNA1CQ13936 2221 aa5.8□□□□□ -1.48
PABPC1-220ENST00000522658 KCNE1BA0A087WTH5 132 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 OR2W5A6NFC9 320 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 GOLGA6L6A8MZA4 724 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 EIF3FO00303 357 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 SLC16A5O15375 505 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 WISP2O76076 250 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 ZFAND5O76080 213 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 TOXO94900 526 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 RAF1P04049 648 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 IFNA16P05015 189 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 ZNF888P0CJ79 500 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 IGFBP2P18065 325 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 HNF4AP41235 474 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 STXBP1P61764 594 aaKnown RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 OLR1P78380 273 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 PPP2R2BQ00005 443 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 CDK16Q00536 496 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 SLC13A2Q13183 592 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 KLF1Q13351 362 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 NAE1Q13564 534 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 DHX34Q14147 1143 aaKnown RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 CSHL1Q14406 222 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 GBX1Q14549 363 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 RPS6KA1Q15418 735 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 FLYWCH1Q4VC44 716 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 CMPK2Q5EBM0 449 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 C1orf185Q5T7R7 199 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 NEPROQ6NW34 567 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 LCTLQ6UWM7 567 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 CES3Q6UWW8 571 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 IL20RBQ6UXL0 311 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 CLEC9AQ6UXN8 241 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 FAM47EQ6ZV65 393 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 VN1R4Q7Z5H5 301 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 MFSD9Q8NBP5 474 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 PSD4Q8NDX1 1056 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 ZNF740Q8NDX6 193 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 B3GNT7Q8NFL0 401 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 OR5T3Q8NGG3 340 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 ELP5Q8TE02 316 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 C1orf54Q8WWF1 131 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 ATL1Q8WXF7 558 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 NRGNQ92686 78 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 NCLNQ969V3 563 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 MFSD3Q96ES6 412 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 BIRC8Q96P09 236 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 GPR21Q99679 349 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 NPAS2Q99743 824 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 TREX2Q9BQ50 279 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 AIF1LQ9BQI0 150 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 YIPF4Q9BSR8 244 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 FAM167BQ9BTA0 163 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 CXXC4Q9H2H0 198 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 FBXO6Q9NRD1 293 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 TREX1Q9NSU2 369 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 ARL15Q9NXU5 204 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 KCMF1Q9P0J7 381 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 KLHL42Q9P2K6 505 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 COPS7AQ9UBW8 275 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 YARS2Q9Y2Z4 477 aaKnown RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 MMACHCQ9Y4U1 282 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 EPN1Q9Y6I3 576 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 CLCA3PQ9Y6N3 262 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.79□□□□□ -1.48
PABPC1-220ENST00000522658 PDZD2O15018 2839 aa5.79□□□□□ -1.48
PABPC1-220ENST00000522658 ZFHX3Q15911 3703 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 A6NNC1 897 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 HSPB2A8KAH6 182 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 ADAM10O14672 748 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 ARHGEF9O43307 516 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 CHST10O43529 356 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 GALR3O60755 368 aaPredicted RBP5.78□□□□□ -1.48
PABPC1-220ENST00000522658 OR2J2O76002 312 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 COX7A2P14406 83 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 ETS1P14921 441 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 MAOAP21397 527 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 BMP5P22003 454 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 GCKP35557 465 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 SKIV2L2P42285 1042 aaKnown RBP5.78□□□□□ -1.48
PABPC1-220ENST00000522658 VPS41P49754 854 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 ASCL1P50553 236 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 EFNA3P52797 238 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 KCNJ2P63252 427 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 LTBQ06643 244 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 TFF3Q07654 80 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 TGM3Q08188 693 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 BMPR2Q13873 1038 aa5.78□□□□□ -1.48
PABPC1-220ENST00000522658 RBBP5Q15291 538 aaKnown RBP5.78□□□□□ -1.48
PABPC1-220ENST00000522658 PCBP2Q15366 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
PABPC1-220ENST00000522658 SF3B4Q15427 424 aaKnown RBP eCLIP5.78□□□□□ -1.485e-8■■■■■ 37.6
PABPC1-220ENST00000522658 TERF2Q15554 542 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms