RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 WHAMMP3Q1A5X7 153 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 ARHGAP11AQ6P4F7 1023 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 RGS9BPQ6ZS82 235 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 GK5Q6ZS86 529 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 GDF7Q7Z4P5 450 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 OR4N5Q8IXE1 308 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 ZCCHC7Q8N3Z6 543 aaKnown RBP17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 RNF175Q8N4F7 328 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 OR2M7Q8NG81 312 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 ZNF721Q8TF20 911 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 SGCZQ96LD1 299 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 DMRTA2Q96SC8 542 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 DEPPQ9NTK1 212 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 NINJ2Q9NZG7 142 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 COQ3Q9NZJ6 369 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 PPT2Q9UMR5 302 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 IKBKGQ9Y6K9 419 aa17.12■□□□□ 0.33
TOP1MT-216ENST00000522121 PDE9AO76083 593 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 ETHE1O95571 254 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 ALDOAP04075 364 aaKnown RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 INHBAP08476 426 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 CNR1P21554 472 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 ARL1P40616 181 aaPredicted RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 RPS13P62277 151 aaKnown RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 TNFRSF17Q02223 184 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 ZNF750Q32MQ0 723 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 CYP20A1Q6UW02 462 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 NCCRP1Q6ZVX7 275 aaPredicted RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 TAOK1Q7L7X3 1001 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 GOLGA7Q7Z5G4 137 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 CD163Q86VB7 1156 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 SLC22A16Q86VW1 577 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 RELL1Q8IUW5 271 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 GOLM1Q8NBJ4 401 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 OR52N2Q8NGI0 321 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 ATP6V1E2Q96A05 226 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 SENP5Q96HI0 755 aaPredicted RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 C16orf45Q96MC5 204 aaPredicted RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 FAM173AQ9BQD7 235 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 PELOQ9BRX2 385 aaKnown RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 DEFB127Q9H1M4 99 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 LYARQ9NX58 379 aaKnown RBP17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 ATG4BQ9Y4P1 393 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 MYO9AB2RTY4 2548 aa17.11■□□□□ 0.33
TOP1MT-216ENST00000522121 LRRC14BA6NHZ5 514 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 ADAM10O14672 748 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 RBP1P09455 135 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 ALOX15P16050 662 aaPredicted RBP17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 FOLH1Q04609 750 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 CUL3Q13618 768 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 MPEG1Q2M385 716 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 NDUFAF5Q5TEU4 345 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 C18orf63Q68DL7 685 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 TMEM211Q6ICI0 200 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 L3MBTL4Q8NA19 623 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 CA5BP1Q8WTZ4 195 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 PPWD1Q96BP3 646 aaKnown RBP17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 SCYL1Q96KG9 808 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 GPR78Q96P69 363 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 TP63Q9H3D4 680 aaPredicted RBP17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 WDR41Q9HAD4 459 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 PLSCR2Q9NRY7 297 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 SACM1LQ9NTJ5 587 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 TMCO1Q9UM00 188 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 RNF11Q9Y3C5 154 aa17.1■□□□□ 0.33
TOP1MT-216ENST00000522121 FAM166BA8MTA8 275 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 FOXE1O00358 373 aaPredicted RBP17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 PROM1O43490 865 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 SIX3O95343 332 aaPredicted RBP17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 CLDN9O95484 217 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 ACSL3O95573 720 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 P04436 131 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 SERPINB9P50453 376 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 ASPHQ12797 758 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 PIGGQ5H8A4 983 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 TECRLQ5HYJ1 363 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 FAM47EQ6ZV65 393 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 ST13P4Q8IZP2 240 aaPredicted RBP17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 NUBPLQ8TB37 319 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 SLC22A8Q8TCC7 542 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 SLC44A1Q8WWI5 657 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 SDCCAG3Q96C92 435 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 FBXL20Q96IG2 436 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 TTTY12Q9BZ98 90 aa17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 DDX31Q9H8H2 851 aaKnown RBP17.09■□□□□ 0.33
TOP1MT-216ENST00000522121 CREBBPQ92793 2442 aa17.08■□□□□ 0.33
TOP1MT-216ENST00000522121 IQANK1A0A1B0GTG1 560 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 PINLYPA6NC86 204 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 G3V3Y1 287 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 OR10H2O60403 315 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 SMIM24O75264 130 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 EEDO75530 441 aaKnown RBP17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 KRT38O76015 456 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 GPR75O95800 540 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 IGKV3-11P04433 115 aa17.08■□□□□ 0.32
TOP1MT-216ENST00000522121 FAM58BPP0C7Q3 252 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms