RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LILRB1Q8NHL6 650 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SLC35G2Q8TBE7 412 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZPLD1Q8TCW7 415 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 UTP15Q8TED0 518 aaKnown RBP8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 PTPMT1Q8WUK0 201 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 FAM136AQ96C01 138 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 STARD4Q96DR4 205 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZC3HAV1LQ96H79 300 aaKnown RBP8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SMIM10Q96HG1 83 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 FOPNLQ96NB1 174 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 TUBA1CQ9BQE3 449 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 CCDC77Q9BR77 488 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 TMEM204Q9BSN7 226 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 MED18Q9BUE0 208 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 TSSK1BQ9BXA7 367 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SHARPINQ9H0F6 387 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 RHBGQ9H310 441 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 C12orf49Q9H741 205 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 SAMD15Q9P1V8 674 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 LPAR3Q9UBY5 353 aa8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 CHCHD2Q9Y6H1 151 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC9-212ENST00000521944 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 FRG2CA6NGY1 282 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 F8W8V4 182 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 H7C0C1 242 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 CEP104O60308 925 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 NIPSNAP2O75323 286 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 HPNP05981 417 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 DANCRP0C864 163 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 ATP5DP30049 168 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 HSD17B2P37059 387 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 CD79BP40259 229 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 ATP5OP48047 213 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 CDK9P50750 372 aaKnown RBP8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 NAGLUP54802 743 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 KCNJ2P63252 427 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 VLDLRP98155 873 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 NFKBIBQ15653 356 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 KLHL38Q2WGJ6 581 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 EIPR1Q53HC9 387 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 TSTD2Q5T7W7 516 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 PTRHD1Q6GMV3 140 aaKnown RBP8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZNF704Q6ZNC4 412 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 CA13Q8N1Q1 262 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 SGMS2Q8NHU3 365 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 GSDMBQ8TAX9 411 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 TNFRSF13CQ96RJ3 184 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 FAM118BQ9BPY3 351 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 HEMGNQ9BXL5 484 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 KCNF1Q9H3M0 494 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 PIGMQ9H3S5 423 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 KLHL31Q9H511 634 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 PACSIN3Q9UKS6 424 aa8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 CNOT11Q9UKZ1 510 aaKnown RBP8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 BOKQ9UMX3 212 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 BZW2Q9Y6E2 419 aaKnown RBP8.05□□□□□ -1.12
TRAPPC9-212ENST00000521944 PLCE1Q9P212 2302 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 A0A1W2PNV4 684 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 GFYI3L273 518 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 NDUFS4O43181 175 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 SERPING1P05155 500 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 H2AFZP0C0S5 128 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 SLC35G6P0C7Q6 338 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 RNH1P13489 461 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 RPS3P23396 243 aaKnown RBP eCLIP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 HRH2P25021 359 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 CDKN1AP38936 164 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 GRIA1P42261 906 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 SKIV2L2P42285 1042 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 MARCKSL1P49006 195 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 CASP9P55211 416 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 RAB8AP61006 207 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 RPS4XP62701 263 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 MYL5Q02045 173 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 ASPHQ12797 758 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 PWP1Q13610 501 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 RUNX2Q13950 521 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 MPEG1Q2M385 716 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 FASTKD1Q53R41 847 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 THEMIS2Q5TEJ8 643 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 MEI1Q5TIA1 1274 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 OPN5Q6U736 354 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 CYHR1Q6ZMK1 362 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 CLEC17AQ6ZS10 378 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 BEND4Q6ZU67 534 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 BBS12Q6ZW61 710 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 H2AFVQ71UI9 128 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 REXO1L1PQ8IX06 675 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 HOMEZQ8IX15 550 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 PPHLN1Q8NEY8 458 aaKnown RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR10H5Q8NGA6 315 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR10G3Q8NGC4 313 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 OR8K3Q8NH51 312 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 ACTL9Q8TC94 416 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 ASB11Q8WXH4 323 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 JSRP1Q96MG2 331 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 ZFP3Q96NJ6 502 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 NAP1L5Q96NT1 182 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 GNRHR2Q96P88 292 aa8.04□□□□□ -1.12
TRAPPC9-212ENST00000521944 ALS2CR12Q96Q35 445 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms