RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 DAZLQ92904 295 aaKnown RBP19.25■□□□□ 0.67
TRIM35-203ENST00000521253 KCNA7Q96RP8 456 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 UTP23Q9BRU9 249 aaKnown RBP19.25■□□□□ 0.67
TRIM35-203ENST00000521253 TMEM109Q9BVC6 243 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 MID1IP1Q9NPA3 183 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 TIMM22Q9Y584 194 aa19.25■□□□□ 0.67
TRIM35-203ENST00000521253 GLOD5A6NK44 160 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 C17orf105B2RV13 164 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 PRAMEF2O60811 474 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 ULK1O75385 1050 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 HSD3B1P14060 373 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 TNNI3P19429 210 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 GNLYP22749 145 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 HSD3B2P26439 372 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 STT3AP46977 705 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 MLF1P58340 268 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 NAA20P61599 178 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 CFAP157Q5JU67 520 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 CCNYL2Q5T2Q4 361 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 C10orf107Q8IVU9 208 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 ARMC10Q8N2F6 343 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 MORN4Q8NDC4 146 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 C7orf57Q8NEG2 295 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 SUN3Q8TAQ9 357 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 THAP3Q8WTV1 239 aaPredicted RBP19.24■□□□□ 0.67
TRIM35-203ENST00000521253 UCN3Q969E3 161 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 SIGLEC12Q96PQ1 595 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 OR8D2Q9GZM6 311 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
TRIM35-203ENST00000521253 WDR41Q9HAD4 459 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 NMRK1Q9NWW6 199 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 TEX10Q9NXF1 929 aaPredicted RBP19.24■□□□□ 0.67
TRIM35-203ENST00000521253 VPS29Q9UBQ0 182 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 MID2Q9UJV3 735 aa19.24■□□□□ 0.67
TRIM35-203ENST00000521253 COL12A1Q99715 3063 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 ARHGAP10A1A4S6 786 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 PRKNO60260 465 aaPredicted RBP19.23■□□□□ 0.67
TRIM35-203ENST00000521253 SPAG7O75391 227 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 DDAH2O95865 285 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 TUBBP07437 444 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 CHN1P15882 459 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 FOXA1P55317 472 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 ZNF844Q08AG5 666 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 CSTF3Q12996 717 aaKnown RBP19.23■□□□□ 0.67
TRIM35-203ENST00000521253 PCLAFQ15004 111 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 OR1C1Q15619 314 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 ZNF468Q5VIY5 522 aaPredicted RBP19.23■□□□□ 0.67
TRIM35-203ENST00000521253 LIPMQ5VYY2 423 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 ZNF321PQ8N8H1 164 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 MDS2Q8NDY4 140 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 GRHL3Q8TE85 626 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 PPWD1Q96BP3 646 aaKnown RBP19.23■□□□□ 0.67
TRIM35-203ENST00000521253 DGAT2Q96PD7 388 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 ACPTQ9BZG2 426 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 AGPAT4Q9NRZ5 378 aa19.23■□□□□ 0.67
TRIM35-203ENST00000521253 PGRMC2O15173 223 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 ZFAND5O76080 213 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 GPR75O95800 540 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 COX7A2P14406 83 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 ALOX15P16050 662 aaPredicted RBP19.22■□□□□ 0.67
TRIM35-203ENST00000521253 CREB1P16220 341 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 MAPK12P53778 367 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 PLIN5Q00G26 463 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 OC90Q02509 493 aaPredicted RBP19.22■□□□□ 0.67
TRIM35-203ENST00000521253 BIKQ13323 160 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 NR6A1Q15406 480 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 KRT71Q3SY84 523 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 SPINK14Q6IE38 97 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 OR52E8Q6IFG1 317 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 DGAT2L6Q6ZPD8 337 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 C1orf52Q8N6N3 182 aaKnown RBP19.22■□□□□ 0.67
TRIM35-203ENST00000521253 GBP7Q8N8V2 638 aaPredicted RBP19.22■□□□□ 0.67
TRIM35-203ENST00000521253 SLC2A12Q8TD20 617 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 RBM18Q96H35 190 aaKnown RBP19.22■□□□□ 0.67
TRIM35-203ENST00000521253 FAM111AQ96PZ2 611 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 TAAR6Q96RI8 345 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 SLC17A7Q9P2U7 560 aa19.22■□□□□ 0.67
TRIM35-203ENST00000521253 CCDC151A5D8V7 595 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 TMEM200CA6NKL6 621 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 CDK2AP1O14519 115 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 FCHO1O14526 889 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 NEURL1O76050 574 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 HMGCS1Q01581 520 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 MRPL49Q13405 166 aaKnown RBP19.21■□□□□ 0.67
TRIM35-203ENST00000521253 INAQ16352 499 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 ZNF766Q5HY98 468 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 NDUFAF5Q5TEU4 345 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 SCIMPQ6UWF3 145 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 FAM180AQ6UWF9 173 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 HSDL2Q6YN16 418 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 ST13P4Q8IZP2 240 aaPredicted RBP19.21■□□□□ 0.67
TRIM35-203ENST00000521253 TCP10LQ8TDR4 215 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 CHTF18Q8WVB6 975 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 FAR1Q8WVX9 515 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 SREK1Q8WXA9 508 aaKnown RBP19.21■□□□□ 0.67
TRIM35-203ENST00000521253 SMC6Q96SB8 1091 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 HES7Q9BYE0 225 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 LIN28AQ9H9Z2 209 aaKnown RBP19.21■□□□□ 0.67
TRIM35-203ENST00000521253 TNFRSF12AQ9NP84 129 aa19.21■□□□□ 0.67
TRIM35-203ENST00000521253 LRFN1Q9P244 771 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms