RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 SH2D2AQ9NP31 389 aa18.74■□□□□ 0.59
PABPC1-217ENST00000521067 SACM1LQ9NTJ5 587 aa18.74■□□□□ 0.59
PABPC1-217ENST00000521067 TXNDC16Q9P2K2 825 aa18.74■□□□□ 0.59
PABPC1-217ENST00000521067 ATG4BQ9Y4P1 393 aa18.74■□□□□ 0.59
PABPC1-217ENST00000521067 UBXN8O00124 270 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 NADKO95544 446 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-217ENST00000521067 HOXD4P09016 255 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-217ENST00000521067 SLC35E2BP0CK96 405 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 GLI4P10075 376 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 PCNAP12004 261 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 CPN2P22792 545 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 ACVR2AP27037 513 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 PIGAP37287 484 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 PCDH1Q08174 1060 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 SLAMF1Q13291 335 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 MPEG1Q2M385 716 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 HYAL4Q2M3T9 481 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 AP5B1Q2VPB7 878 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 ZNF791Q3KP31 576 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-217ENST00000521067 TMEM35AQ53FP2 167 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 DEPDC1Q5TB30 811 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 MED27Q6P2C8 311 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 OPN5Q6U736 354 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 FAM47EQ6ZV65 393 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 ACAD11Q709F0 780 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 LIX1LQ8IVB5 337 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 CDKL2Q92772 493 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 GRPEL1Q9HAV7 217 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 PROK2Q9HC23 129 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 IGSF5Q9NSI5 407 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 WHRNQ9P202 907 aa18.73■□□□□ 0.59
PABPC1-217ENST00000521067 ZNF469Q96JG9 3925 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-217ENST00000521067 ATP6AP2A0A1C7CYW4 349 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 OR14I1A6ND48 311 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 BCKDKO14874 412 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 EIF3HO15372 352 aaKnown RBP eCLIP18.72■□□□□ 0.59
PABPC1-217ENST00000521067 PRKRAO75569 313 aaKnown RBP18.72■□□□□ 0.59
PABPC1-217ENST00000521067 ATP6AP2O75787 350 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 MTHFD2P13995 350 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 ENDOUP21128 410 aaKnown RBP18.72■□□□□ 0.59
PABPC1-217ENST00000521067 SSR2P43308 183 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 STT3AP46977 705 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 TRADDQ15628 312 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 KBTBD12Q3ZCT8 623 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 KHDRBS2Q5VWX1 349 aaKnown RBP18.72■□□□□ 0.59
PABPC1-217ENST00000521067 C18orf63Q68DL7 685 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 OR4C11Q6IEV9 310 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 CHSY3Q70JA7 882 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 CTAGE3PQ8IX95 158 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 BBOF1Q8ND07 529 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 STAG3L4Q8TBR4 150 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 CNPPD1Q9BV87 410 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 PHACTR1Q9C0D0 580 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 PHF3Q92576 2039 aaKnown RBP18.72■□□□□ 0.59
PABPC1-217ENST00000521067 ITPR3Q14573 2671 aa18.72■□□□□ 0.59
PABPC1-217ENST00000521067 AKAP6Q13023 2319 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 A0A0G2JNJ9 132 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 K7EPI3 171 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 AQP7O14520 342 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 RAD51CO43502 376 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 P04436 131 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 RFPL3SP0C7P2 107 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 SPRP35270 261 aaPredicted RBP18.71■□□□□ 0.59
PABPC1-217ENST00000521067 ADH7P40394 386 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 DLX5P56178 289 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 SLC10A1Q14973 349 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 GRTP1Q5TC63 336 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 B3GNT6Q6ZMB0 384 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 PPM1NQ8N819 430 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 OR10Q1Q8NGQ4 319 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 HUS1BQ8NHY5 278 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 NUBPLQ8TB37 319 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 UCN3Q969E3 161 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 UBE2E3Q969T4 207 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 CMTM7Q96FZ5 175 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 DGAT2Q96PD7 388 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 NUDT4Q9NZJ9 180 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 SPRR3Q9UBC9 169 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 RNF14Q9UBS8 474 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 Q9UFV3 132 aa18.71■□□□□ 0.59
PABPC1-217ENST00000521067 FAM187AA6NFU0 413 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 PLPP1O14494 284 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 KLK8O60259 260 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 SUSD5O60279 629 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 S100BP04271 92 aaPredicted RBP18.7■□□□□ 0.58
PABPC1-217ENST00000521067 HNRNPH2P55795 449 aaKnown RBP18.7■□□□□ 0.58
PABPC1-217ENST00000521067 FOLH1Q04609 750 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 CALCOCO2Q13137 446 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 DDX39BQ13838 428 aaKnown RBP18.7■□□□□ 0.58
PABPC1-217ENST00000521067 GRHL2Q6ISB3 625 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 SPATA4Q8NEY3 305 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 UBTD2Q8WUN7 234 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 NRGNQ92686 78 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 NXNL1Q96CM4 212 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 ZNF717Q9BY31 904 aaPredicted RBP18.7■□□□□ 0.58
PABPC1-217ENST00000521067 RPF2Q9H7B2 306 aaKnown RBP18.7■□□□□ 0.58
PABPC1-217ENST00000521067 OPTCQ9UBM4 332 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 COPS7AQ9UBW8 275 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 ACAD8Q9UKU7 415 aa18.7■□□□□ 0.58
PABPC1-217ENST00000521067 PYCARDQ9ULZ3 195 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms