RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FAM192AQ9GZU8 254 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 NAPBQ9H115 298 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 DPH5Q9H2P9 285 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SNX25Q9H3E2 840 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 HAUS4Q9H6D7 363 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 POLD4Q9HCU8 107 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 INIPQ9NRY2 104 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SAMSN1Q9NSI8 373 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 MAN2C1Q9NTJ4 1040 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 PLCXD1Q9NUJ7 323 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPATA7Q9P0W8 599 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRIM10Q9UDY6 481 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 RWDD2AQ9UIY3 292 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SNX12Q9UMY4 172 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 RPL26L1Q9UNX3 145 aaKnown RBP2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 R4GN57 208 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 AKAP11Q9UKA4 1901 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 TJP1Q07157 1748 aa2.87□□□□□ -1.95
HMGB1P41-201ENST00000520234 SMCHD1A6NHR9 2005 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PSME4Q14997 1843 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 KIF13BQ9NQT8 1826 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRBV5-5A0A0J9YX44 114 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 A0A1W2PPW3 197 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 C15orf61A6NNL5 157 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 A8MUI8 341 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRAFD1O14545 582 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 BIRC5O15392 142 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TEX28O15482 410 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PRKAB2O43741 272 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF821O75541 412 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZFAND5O76080 213 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 NXPH2O95156 264 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 SEC24AO95486 1093 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 GNA14O95837 355 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 C9P02748 559 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT16P08779 473 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPP1P10451 314 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PRKAR1AP10644 381 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PDGFRAP16234 1089 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ADRA2CP18825 462 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CALB2P22676 271 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CD27P26842 260 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CALML3P27482 149 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT2P35908 639 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PPP1R2P41236 205 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 LEPRP48357 1165 aaKnown RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRPC1P48995 793 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 DNA2P51530 1060 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF131P52739 623 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 AKAP17AQ02040 695 aaKnown RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ORC2Q13416 577 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRADDQ15628 312 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF74Q16587 644 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CDO1Q16878 200 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PARP6Q2NL67 630 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 KBTBD12Q3ZCT8 623 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 USH1GQ495M9 461 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 GPR33Q49SQ1 333 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 LRRC23Q53EV4 343 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CAVIN4Q5BKX8 364 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 LRRC73Q5JTD7 316 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF658Q5TYW1 1059 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 SHEQ5VZ18 495 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 FAAP20Q6NZ36 180 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 SUSD1Q6UWL2 747 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 NRARPQ7Z6K4 114 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 RCOR2Q8IZ40 523 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ARFGAP2Q8N6H7 521 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ANKRD13CQ8N6S4 541 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC63Q8NA47 563 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 STKLD1Q8NE28 680 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 OR2T6Q8NHC8 308 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 MAPK15Q8TD08 544 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 MIPOL1Q8TD10 442 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 GATAD1Q8WUU5 269 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 APOBEC4Q8WW27 367 aaKnown RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 METTL21AQ8WXB1 218 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 RSPH1Q8WYR4 309 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 PIK3R3Q92569 461 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 RAD54LQ92698 747 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 P2RX5Q93086 422 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 DHTKD1Q96HY7 919 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZMAT2Q96NC0 199 aaKnown RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMEM237Q96Q45 408 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 XPO6Q96QU8 1125 aaKnown RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CDCA3Q99618 268 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CHP1Q99653 195 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC3Q9BQI4 270 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 UBAC1Q9BSL1 405 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 INPP5KQ9BT40 448 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMEM109Q9BVC6 243 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPATA16Q9BXB7 569 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CLEC7AQ9BXN2 247 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCSER1Q9C0I3 900 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 CUEDC2Q9H467 287 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 THAP9Q9H5L6 903 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 RNPEPL1Q9HAU8 725 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 MAGEF1Q9HAY2 307 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMEM165Q9HC07 324 aa2.86□□□□□ -1.95
HMGB1P41-201ENST00000520234 RMND1Q9NWS8 449 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms