RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ASB11Q8WXH4 323 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 ZBTB8AQ96BR9 441 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 LRRC58Q96CX6 371 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 VMP1Q96GC9 406 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 GNRHR2Q96P88 292 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 GSDMAQ96QA5 445 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 SLC39A3Q9BRY0 314 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 TRABDQ9H4I3 376 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 FN3KRPQ9HA64 309 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 HOMER3Q9NSC5 361 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 AURKAIP1Q9NWT8 199 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 IMPACTQ9P2X3 320 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 BOKQ9UMX3 212 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 USP22Q9UPT9 525 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 ACTL7BQ9Y614 415 aa6.03□□□□□ -1.44
CTNNA1-216ENST00000519489 DNAH10Q8IVF4 4471 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 MYOCOSA0A1B0GUC4 107 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 TMEM191CA6NGB0 347 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 E7EQL1 145 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 F8VZ95 297 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 H7C417 338 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 EIF3FO00303 357 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 DLX3O60479 287 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 VPS26AO75436 327 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 GFPT2O94808 682 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 CD3EP07766 207 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 CD8BP10966 210 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 RALBP11234 206 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 OMGP23515 440 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 CMA1P23946 247 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 CCR7P32248 378 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 SERPINB6P35237 376 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 ADMP35318 185 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 EFNA4P52798 201 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 PNLIPRP1P54315 467 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 DVL1P1P54792 670 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 WNT3AP56704 352 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 FUT7Q11130 342 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 NAA25Q14CX7 972 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 TSC22D1Q15714 1073 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 NDUFA9Q16795 377 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 SPRED3Q2MJR0 410 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 CTU2Q2VPK5 515 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 DNAJC21Q5F1R6 531 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 SLC22A10Q63ZE4 541 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 DCUN1D2Q6PH85 259 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 ENPP6Q6UWR7 440 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 B3GLCTQ6Y288 498 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 ZNF793Q6ZN11 406 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 QSOX2Q6ZRP7 698 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 CDKL3Q8IVW4 592 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 DCUN1D3Q8IWE4 304 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 SLC22A15Q8IZD6 547 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 ZNF619Q8N2I2 560 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 AFAP1L2Q8N4X5 818 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 PQLC3Q8N755 202 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 OR10G3Q8NGC4 313 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 ATL1Q8WXF7 558 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 C22orf15Q8WYQ4 148 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 FIG4Q92562 907 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 TM4SF19Q96DZ7 209 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 OXNAD1Q96HP4 312 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 PDLIM2Q96JY6 352 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 TEKT5Q96M29 485 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 KRT12Q99456 494 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 RSPO3Q9BXY4 272 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 ACTR6Q9GZN1 396 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 ACSS3Q9H6R3 686 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 MYO1AQ9UBC5 1043 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 SLC39A10Q9ULF5 831 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 R3HDM2Q9Y2K5 976 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 PKP3Q9Y446 797 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 SCN3AQ9NY46 2000 aa6.02□□□□□ -1.45
CTNNA1-216ENST00000519489 LOC105371242A0A075B767 164 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 ESYT3A0FGR9 886 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 H0Y3Z8 333 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 PLOD2O00469 737 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 CLDN9O95484 217 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 CALB1P05937 261 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 PEPDP12955 493 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 PPP3CBP16298 524 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 ACRV1P26436 265 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 CMPK1P30085 196 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 TTKP33981 857 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 SYKP43405 635 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 NSFP46459 744 aaKnown RBP6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 KCNC1P48547 511 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 HNRNPFP52597 415 aaKnown RBP6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 EIF3BP55884 814 aaKnown RBP6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 CLDN15P56746 228 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 IL13RA1P78552 427 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 IRF9Q00978 393 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 CUL4AQ13619 759 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 IQCCQ4KMZ1 466 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 PIGGQ5H8A4 983 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 KLHDC7AQ5VTJ3 777 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 KLHL10Q6JEL2 608 aa6.01□□□□□ -1.45
CTNNA1-216ENST00000519489 ZNF449Q6P9G9 518 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms