RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 RNF44Q7L0R7 432 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 DGLUCYQ7Z3D6 616 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 VN1R4Q7Z5H5 301 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 ASPGQ86U10 573 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 OR2L5Q8NG80 312 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 GATA6Q92908 595 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 UCN3Q969E3 161 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 ZNF597Q96LX8 424 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 OR2A5Q96R48 311 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.22
CLN8-204ENST00000519254 CD180Q99467 661 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 SLC35A5Q9BS91 424 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 IRF2BPLQ9H1B7 796 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 VCXQ9H320 206 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 RAB26Q9ULW5 256 aa13.71□□□□□ -0.22
CLN8-204ENST00000519254 MN1Q10571 1320 aaPredicted RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 A0A1W2PQM1 296 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 EIF4E1BA6NMX2 242 aaKnown RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 H0YGG7 62 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 AGRPO00253 132 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 ACOX3O15254 700 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 P2RX6O15547 441 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 LDLRP01130 860 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 FAM58BPP0C7Q3 252 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 SLC35G6P0C7Q6 338 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 IL1RNP18510 177 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 ATP5A1P25705 553 aaKnown RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 NBL1P41271 181 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 FRKP42685 505 aaPredicted RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 ALDH9A1P49189 494 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 ARL4DP49703 201 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 ARFIP1P53367 373 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 PCBP4P57723 403 aaKnown RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 VSX2P58304 361 aaPredicted RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 ARF3P61204 181 aaPredicted RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 COX20Q5RI15 118 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 INTS11Q5TA45 600 aaKnown RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 MRM1Q6IN84 353 aaKnown RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 WDR74Q6RFH5 385 aaPredicted RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 NAXDQ8IW45 347 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 OR8K5Q8NH50 307 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 SLC47A1Q96FL8 570 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 TCTN2Q96GX1 697 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 ZNF764Q96H86 408 aaPredicted RBP13.7□□□□□ -0.22
CLN8-204ENST00000519254 KCNC2Q96PR1 638 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 LRRN3Q9H3W5 708 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 NTN4Q9HB63 628 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 C5AR2Q9P296 337 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 UTS2RQ9UKP6 389 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 OAZ3Q9UMX2 235 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 RP1P56715 2156 aa13.7□□□□□ -0.22
CLN8-204ENST00000519254 ASXL3Q9C0F0 2248 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 C4orf47A7E2U8 309 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 PDLIM1O00151 329 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 UPK1AO00322 258 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 TXNDC9O14530 226 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 CLOCKO15516 846 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 PRSS23O95084 383 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 ZBTB11O95625 1053 aaPredicted RBP13.69□□□□□ -0.22
CLN8-204ENST00000519254 C9P02748 559 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 CD59P13987 128 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 HIST1H1TP22492 207 aaPredicted RBP13.69□□□□□ -0.22
CLN8-204ENST00000519254 HSPA13P48723 471 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 RGS1Q08116 209 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 MED21Q13503 144 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 KCNAB1Q14722 419 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 CCDC157Q569K6 752 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 DBX2Q6ZNG2 339 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 TMPRSS9Q7Z410 1059 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 CBR4Q8N4T8 237 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 TRIML2Q8N7C3 387 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 ACOT4Q8N9L9 421 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 KCT2Q8NC54 265 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 ZCCHC10Q8TBK6 192 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 EPS8L2Q9H6S3 715 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 CXorf36Q9H7Y0 433 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 STARD5Q9NSY2 213 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 TAS2R7Q9NYW3 318 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 ACSL6Q9UKU0 697 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 ASB4Q9Y574 426 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 AP4B1Q9Y6B7 739 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
CLN8-204ENST00000519254 PDPK1O15530 556 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 TNFRSF21O75509 655 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 CPNE6O95741 557 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 CTSBP07858 339 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 DRD2P14416 443 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 KDELR2P33947 212 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 CASP9P55211 416 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 RAB8AP61006 207 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 SLAMF1Q13291 335 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 BLMHQ13867 455 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 VEZF1Q14119 521 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 ZC3H12BQ5HYM0 836 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 C6orf52Q5T4I8 152 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 NDUFAF5Q5TEU4 345 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 TRIM40Q6P9F5 258 aa13.68□□□□□ -0.22
CLN8-204ENST00000519254 MCATQ8IVS2 390 aaKnown RBP13.68□□□□□ -0.22
CLN8-204ENST00000519254 EID3Q8N140 333 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms