RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 C17orf105B2RV13 164 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 COPEO14579 308 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 TNNI3P19429 210 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 PTGER1P34995 402 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 TDGF1P3P51864 188 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 ARFIP1P53367 373 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 TAS2R50P59544 299 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 RAE1P78406 368 aaKnown RBP12.38□□□□□ -0.43
VEGFA-219ENST00000518824 HMGCS1Q01581 520 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 OC90Q02509 493 aaPredicted RBP12.38□□□□□ -0.43
VEGFA-219ENST00000518824 RCN2Q14257 317 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 PCLAFQ15004 111 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 TERF2Q15554 542 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 RPUSD3Q6P087 351 aaKnown RBP12.38□□□□□ -0.43
VEGFA-219ENST00000518824 FAM180BQ6P0A1 224 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 EMBQ6PCB8 327 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 C10orf107Q8IVU9 208 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 ARMC10Q8N2F6 343 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 TMEM132CQ8N3T6 1108 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 C1orf52Q8N6N3 182 aaKnown RBP12.38□□□□□ -0.43
VEGFA-219ENST00000518824 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 MYRIPQ8NFW9 859 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 METTL6Q8TCB7 284 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 ZNF721Q8TF20 911 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 VMP1Q96GC9 406 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 UTP23Q9BRU9 249 aaKnown RBP12.38□□□□□ -0.43
VEGFA-219ENST00000518824 CENPKQ9BS16 269 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 ACPTQ9BZG2 426 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 PPCSQ9HAB8 311 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 MID1IP1Q9NPA3 183 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
VEGFA-219ENST00000518824 LGALS13Q9UHV8 139 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 PHF11Q9UIL8 331 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 GRID1Q9ULK0 1009 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 SPACA6W5XKT8 324 aa12.38□□□□□ -0.43
VEGFA-219ENST00000518824 DOPEY2Q9Y3R5 2298 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 ZNHIT1O43257 154 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 ITGA10O75578 1167 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 NR2F6P10588 404 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 CPA3P15088 417 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 HMOX2P30519 316 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 STT3AP46977 705 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 CCT5P48643 541 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 DUSP2Q05923 314 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 LCP2Q13094 533 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 SERTAD2Q14140 314 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 UBAP2LQ14157 1087 aaKnown RBP12.37□□□□□ -0.43
VEGFA-219ENST00000518824 CCDC153Q494R4 210 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 CCNYL2Q5T2Q4 361 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 GALNTL5Q7Z4T8 443 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 SRRM1Q8IYB3 904 aaKnown RBP12.37□□□□□ -0.43
VEGFA-219ENST00000518824 CCDC63Q8NA47 563 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 CHTF18Q8WVB6 975 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 TANKQ92844 425 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 TM4SF18Q96CE8 201 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 SCMH1Q96GD3 660 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 APIPQ96GX9 242 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 SENP5Q96HI0 755 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-219ENST00000518824 DGAT2Q96PD7 388 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 SLX1AQ9BQ83 275 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 MECRQ9BV79 373 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 GATA5Q9BWX5 397 aaPredicted RBP12.37□□□□□ -0.43
VEGFA-219ENST00000518824 BRF2Q9HAW0 419 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 OXSMQ9NWU1 459 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 MS4A12Q9NXJ0 267 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 LRFN1Q9P244 771 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 RAB21Q9UL25 225 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 SNX6Q9UNH7 406 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 PLLPQ9Y342 182 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 PTGDR2Q9Y5Y4 395 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 CLCA3PQ9Y6N3 262 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 HIVEP3Q5T1R4 2406 aa12.37□□□□□ -0.43
VEGFA-219ENST00000518824 RP1L1Q8IWN7 2480 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-219ENST00000518824 ANKUB1A6NFN9 424 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 WWP2O00308 870 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 OR2J2O76002 312 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 ZFAND5O76080 213 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 RASAL1O95294 804 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 ESRRBO95718 433 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 GPR75O95800 540 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 MLYCDO95822 493 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 CLPSP04118 112 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 IGKV3-11P04433 115 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 CT62P0C5K7 136 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 ALOX15P16050 662 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-219ENST00000518824 BUD31P41223 144 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-219ENST00000518824 HK2P52789 917 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 KCNK10P57789 538 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 DNAJB13P59910 316 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 ERVK-8P63133 956 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 BTKQ06187 659 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 IFFO1Q0D2I5 559 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 RNFT1Q5M7Z0 435 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 NDUFAF5Q5TEU4 345 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 FAM180AQ6UWF9 173 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 FRMD7Q6ZUT3 714 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 MDGA2Q7Z553 956 aa12.36□□□□□ -0.43
VEGFA-219ENST00000518824 C9orf40Q8IXQ3 194 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms