RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ADGRF2Q8IZF7 708 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 CACNG8Q8WXS5 425 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 RGP1Q92546 391 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 GTF3C6Q969F1 213 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 KLHL5Q96PQ7 755 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 OR6C1Q96RD1 312 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 CDCA3Q99618 268 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 PKMYT1Q99640 499 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 NDFIP1Q9BT67 221 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 MARCH5Q9NX47 278 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 KCNN3Q9UGI6 736 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 DERAQ9Y315 318 aa-1.7□□□□□ -2.68
RNU6-539P-201ENST00000516665 PLXNA3P51805 1871 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 DOCK8Q8NF50 2099 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 IGKV1-9A0A0C4DH69 117 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 LRRC53A6NM62 1247 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 TNFSF9P41273 254 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 F2RL1P55085 397 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 UFM1P61960 85 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF154Q13106 437 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 CUL4BQ13620 913 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 EIF4A2Q14240 407 aaKnown RBP-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 GLYR1Q49A26 553 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 SLC9B1Q4ZJI4 515 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 ANKRD26P1Q6NSI1 321 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 NEPROQ6NW34 567 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 ARSKQ6UWY0 536 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 TMPRSS11FQ6ZWK6 438 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 Q71RC1 249 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 UNC5CLQ8IV45 518 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 ARL14Q8N4G2 192 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 NKAPQ8N5F7 415 aaKnown RBP-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 MOSPD2Q8NHP6 518 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 ZNF625Q96I27 306 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 LURAP1Q96LR2 239 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 CNPY3Q9BT09 278 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 C10orf95Q9H7T3 257 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 BRF2Q9HAW0 419 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 C6orf203Q9P0P8 240 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 MBD2Q9UBB5 411 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 PILRBQ9UKJ0 227 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 INTS6Q9UL03 887 aaKnown RBP-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 NPHP3Q7Z494 1330 aa-1.71□□□□□ -2.68
RNU6-539P-201ENST00000516665 GJE1A6NN92 205 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 LMO7DNF2Z398 122 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 APAF1O14727 1248 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 XRCC3O43542 346 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 ANGPTL7O43827 346 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 CHST1O43916 411 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 SSX4O60224 188 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 PCCBP05166 539 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 LINC00869P0C866 280 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 FEN1P39748 380 aaKnown RBP-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 PPM1FP49593 454 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 APOC4P55056 127 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 KLC1Q07866 573 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 PHKG1Q16816 387 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 SYT14P1Q58G82 188 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 RRM2BQ7LG56 351 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 NLRP14Q86W24 1093 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 RCOR2Q8IZ40 523 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 CADM2Q8N3J6 435 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 ALLCQ8N6M5 410 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 GVQW1Q8N7I0 195 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 GATSQ8NAP1 163 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 C10orf105Q8TEF2 133 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 CRYGNQ8WXF5 182 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 MRPS27Q92552 414 aaKnown RBP-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 OR2M2Q96R28 347 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 SEPT5Q99719 369 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 DPH7Q9BTV6 452 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 FNDC11Q9BVV2 318 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 CDH19Q9H159 772 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 DCTPP1Q9H773 170 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 C3orf14Q9HBI5 128 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 RANGRFQ9HD47 186 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 FOXA2Q9Y261 457 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 PRKAB1Q9Y478 270 aa-1.72□□□□□ -2.68
RNU6-539P-201ENST00000516665 HERC2O95714 4834 aa-1.72□□□□□ -2.69
RNU6-539P-201ENST00000516665 CACNA1CQ13936 2221 aa-1.72□□□□□ -2.69
RNU6-539P-201ENST00000516665 IPO5O00410 1097 aaKnown RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 ENTPD5O75356 428 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 GLSO94925 669 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 GH2P01242 217 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 SEMG1P04279 462 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 ADRA2AP08913 450 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 NUDT17P0C025 328 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 P0DMU3 169 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 FAM231AP0DMU4 169 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 FAM231CP0DMU5 169 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 CST5P28325 142 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 HOXD10P28358 340 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 CALCRP30988 508 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 UGT1A5P35504 534 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 RAB27AP51159 221 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 VAMP7P51809 220 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 ARHGDIAP52565 204 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 ARHGDIBP52566 201 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 EVCP57679 992 aa-1.73□□□□□ -2.69
RNU6-539P-201ENST00000516665 BCL2L1Q07817 233 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms