RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SIX3O95343 332 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TGDSO95455 350 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NSA2O95478 260 aaKnown RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CLDN9O95484 217 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CNOT4O95628 575 aaKnown RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ONECUT2O95948 504 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KRT6AP02538 564 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KRT6BP04259 564 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SERPINA6P08185 405 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ADRB1P08588 477 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FGF4P08620 206 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HBQ1P09105 142 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SLC35G6P0C7Q6 338 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SMIM10L1P0DMW3 83 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 C1GALT1C1LP0DN25 315 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 UROSP10746 265 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FGF3P11487 239 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FGF5P12034 268 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NCF1P14598 390 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ALOX15P16050 662 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NPPBP16860 134 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TYRP1P17643 537 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HK1P19367 917 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CD22P20273 847 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZNF10P21506 573 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PRPH2P23942 346 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PSMB5P28074 263 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 EEF1DP29692 281 aaKnown RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ALDH3A1P30838 453 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CSTF2P33240 577 aaKnown RBP eCLIP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RORAP35398 523 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MSX2P35548 267 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PIK3CBP42338 1070 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GSTM5P46439 218 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KCNJ5P48544 419 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KRT6CP48668 564 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 AGTR2P50052 363 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CCNG1P51959 295 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ARSFP54793 590 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ERVPABLB-1P60509 514 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 STXBP1P61764 594 aaKnown RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PPP1CAP62136 330 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SKP1P63208 163 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IRX1P78414 480 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PHEXP78562 749 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CCL7P80098 99 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MC2RQ01718 297 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IRF8Q02556 426 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PLP2Q04941 152 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MGAT2Q10469 447 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CSTF3Q12996 717 aaKnown RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IFT88Q13099 833 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CHIT1Q13231 466 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PRKG2Q13237 762 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MRPL49Q13405 166 aaKnown RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TUBB3Q13509 450 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CUL3Q13618 768 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NFYCQ13952 458 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FAM53BQ14153 422 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 DOC2AQ14183 400 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IL11RAQ14626 422 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 C16orf72Q14CZ0 275 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ELAVL1Q15717 326 aaKnown RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZIC1Q15915 447 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HIST2H2ACQ16777 129 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SMU1Q2TAY7 513 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PRTGQ2VWP7 1150 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FAM214AQ32MH5 1076 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TUBB8Q3ZCM7 444 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 AMZ1Q400G9 498 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TMEM35AQ53FP2 167 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 UNC50Q53HI1 259 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 XKR7Q5GH72 579 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KHDC1LQ5JSQ8 128 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CFAP157Q5JU67 520 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SH2D4BQ5SQS7 431 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TMTC4Q5T4D3 741 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CACHD1Q5VU97 1274 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NKAIN2Q5VXU1 208 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KIAA1614Q5VZ46 1190 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FRG2Q64ET8 278 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ATG16L1Q676U5 607 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FCRL6Q6DN72 434 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HIST2H2AA3Q6FI13 130 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RHBDD2Q6NTF9 364 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IRGCQ6NXR0 463 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MED27Q6P2C8 311 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PRMT9Q6P2P2 845 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TLDC1Q6P9B6 456 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FIGLAQ6QHK4 219 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SUSD1Q6UWL2 747 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 DHRS13Q6UX07 377 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TMIGD1Q6UXZ0 262 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CEACAM20Q6UY09 585 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZNF517Q6ZMY9 492 aaPredicted RBP2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MBOAT1Q6ZNC8 495 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GPRIN3Q6ZVF9 776 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TMPRSS9Q7Z410 1059 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 VN1R4Q7Z5H5 301 aa2.08□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MTERF4Q7Z6M4 381 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms