RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 DNAJC22Q8N4W6 341 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 BMPERQ8N8U9 685 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 THAP8Q8NA92 274 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 LEMD2Q8NC56 503 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 OR5AP2Q8NGF4 316 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 U2AF1L4Q8WU68 220 aaKnown RBP2.8□□□□□ -1.96
HERC4-215ENST00000515753 THRSPQ92748 146 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 DTNBP1Q96EV8 351 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 PGM2Q96G03 612 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 LINC00479Q96M42 142 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 KRT12Q99456 494 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 SPAG8Q99932 426 aaPredicted RBP2.8□□□□□ -1.96
HERC4-215ENST00000515753 ZNF559Q9BR84 538 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 PYGO2Q9BRQ0 406 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 ZNF577Q9BSK1 485 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 MCRIP2Q9BUT9 160 aaKnown RBP2.8□□□□□ -1.96
HERC4-215ENST00000515753 IDI2Q9BXS1 227 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 CCSER1Q9C0I3 900 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 UBQLN3Q9H347 655 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 CPVLQ9H3G5 476 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 CUEDC2Q9H467 287 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 COQ10BQ9H8M1 238 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 Q9H8V8 135 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 RPF1Q9H9Y2 349 aaKnown RBP2.8□□□□□ -1.96
HERC4-215ENST00000515753 KCNMB3Q9NPA1 279 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 A4GALTQ9NPC4 353 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 CENPMQ9NSP4 180 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 ZCCHC3Q9NUD5 404 aaKnown RBP2.8□□□□□ -1.96
HERC4-215ENST00000515753 INTS9Q9NV88 658 aaKnown RBP2.8□□□□□ -1.96
HERC4-215ENST00000515753 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.8□□□□□ -1.96
HERC4-215ENST00000515753 SOHLH2Q9NX45 425 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 COX16Q9P0S2 106 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 B3GAT1Q9P2W7 334 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 HPCAL4Q9UM19 191 aa2.8□□□□□ -1.96
HERC4-215ENST00000515753 NWD2Q9ULI1 1742 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 ADGRB1O14514 1584 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 NSD3Q9BZ95 1437 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 KTN1Q86UP2 1357 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 USP47Q96K76 1375 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 PCDH11YQ9BZA8 1340 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 TMEM129A0AVI4 362 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 NPIPA3F8WFD2 350 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 H0YCG3 227 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 SLC28A1O00337 649 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CDC123O75794 336 aaPredicted RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 SNX4O95219 450 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 OR6A2O95222 327 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 PTBP3O95758 552 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 AK1P00568 194 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 HMBSP08397 361 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 KRT3P12035 628 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 PRG2P13727 222 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 NCF1P14598 390 aaPredicted RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 CPA3P15088 417 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 SOX6P35712 828 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 PEX19P40855 299 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 GBX2P52951 348 aaPredicted RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 MAZP56270 477 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 SSTP61278 116 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 TRA2BP62995 288 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 IRX4P78413 519 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CDR2Q01850 454 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 GCNT1Q02742 428 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CACNG1Q06432 222 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CETN1Q12798 172 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 GIT2Q14161 759 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 TMEM187Q14656 261 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 KARSQ15046 597 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 ITPRIPL2Q3MIP1 535 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 XKR6Q5GH73 641 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 SPDYCQ5MJ68 293 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 FAM166AQ6J272 317 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CD164L2Q6UWJ8 174 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 WDR88Q6ZMY6 472 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 ASPGQ86U10 573 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 LAX1Q8IWV1 398 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 APCDD1Q8J025 514 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 SPAG16Q8N0X2 631 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 ZNF614Q8N883 585 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 OR56B1Q8NGI3 324 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 CHURC1Q8WUH1 139 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 SUSD6Q92537 303 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 ARHGAP45Q92619 1136 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 PYCR2Q96C36 320 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 MOCOSQ96EN8 888 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 COG3Q96JB2 828 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 FAM71F1Q96KD3 344 aaPredicted RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 TSSK2Q96PF2 358 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 GPA33Q99795 319 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 TRAF4Q9BUZ4 470 aaPredicted RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 SLC2A11Q9BYW1 496 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 ACPTQ9BZG2 426 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 TRPV6Q9H1D0 765 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 ACTL8Q9H568 366 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 MRPL17Q9NRX2 175 aaKnown RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 FAM212BQ9NTI7 297 aaPredicted RBP2.79□□□□□ -1.96
HERC4-215ENST00000515753 PIGVQ9NUD9 493 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 PLCXD1Q9NUJ7 323 aa2.79□□□□□ -1.96
HERC4-215ENST00000515753 PKD2L2Q9NZM6 624 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms