RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 STT3AP46977 705 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 IFFO1Q0D2I5 559 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 OR1C1Q15619 314 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 ZNF766Q5HY98 468 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 ZNF324BQ6AW86 544 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 OR52E8Q6IFG1 317 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 FRMD7Q6ZUT3 714 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 TRABD2AQ86V40 505 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 ST13P4Q8IZP2 240 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 FAM26EQ8N5C1 309 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 CDYL2Q8N8U2 506 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 TMEM178AQ8NBL3 297 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 GRHL3Q8TE85 626 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 MTFMTQ96DP5 389 aaKnown RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 SCMH1Q96GD3 660 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 ART5Q96L15 291 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 SLX1AQ9BQ83 275 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 TMEM109Q9BVC6 243 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 MRPL1Q9BYD6 325 aaKnown RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 GSTO2Q9H4Y5 243 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 FARSBQ9NSD9 589 aaKnown RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 OXSMQ9NWU1 459 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 ZNF223Q9UK11 482 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 RAB21Q9UL25 225 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 SLC12A4Q9UP95 1085 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 POLEQ07864 2286 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 SVILO95425 2214 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 A0A1W2PR48 441 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 ARHGAP10A1A4S6 786 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 C17orf105B2RV13 164 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 MAN1A2O60476 641 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 ULK1O75385 1050 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 ZFAND5O76080 213 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 RASAL1O95294 804 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 GPR75O95800 540 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 AIFM1O95831 613 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 DDAH2O95865 285 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 F10P00742 488 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 EDN3P14138 238 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 CPA3P15088 417 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 CD46P15529 392 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 ALOX15P16050 662 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 GNLYP22749 145 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 CYB561P49447 251 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 HLCSP50747 726 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 TRA2BP62995 288 aaKnown RBP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 FOLH1Q04609 750 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 GALNT1Q10472 559 aaPredicted RBP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 NR6A1Q15406 480 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 SPRED3Q2MJR0 410 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 ERCC6LQ2NKX8 1250 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 C18orf63Q68DL7 685 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 HSDL2Q6YN16 418 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 COMMD6Q7Z4G1 85 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 GPALPP1Q8IXQ4 340 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 OR2W6PQ8NHA6 318 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 METTL6Q8TCB7 284 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 SLC2A12Q8TD20 617 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 AGAP11Q8TF27 550 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 RBM18Q96H35 190 aaKnown RBP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 APOPT1Q96IL0 206 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 DGAT2Q96PD7 388 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 TAAR6Q96RI8 345 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 PARD6BQ9BYG5 372 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 IQCGQ9H095 443 aaKnown RBP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 OLAHQ9NV23 265 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 LRFN1Q9P244 771 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 VPS29Q9UBQ0 182 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 COPS7AQ9UBW8 275 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 YARS2Q9Y2Z4 477 aaKnown RBP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 PLLPQ9Y342 182 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 ZGRF1Q86YA3 2104 aa11.9□□□□□ -0.5
CLCN3-210ENST00000515420 ASH1LQ9NR48 2969 aaKnown RBP11.9□□□□□ -0.5
CLCN3-210ENST00000515420 TLDC2A0PJX2 215 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 ANKUB1A6NFN9 424 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 FOXO6A8MYZ6 492 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 NEURL1O76050 574 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 IGKV3-11P04433 115 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 KLK1P06870 262 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 SLC35E2P0CK97 266 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 TNNI3P19429 210 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 GSTM5P46439 218 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 MAPK12P53778 367 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 NAGLUP54802 743 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 OC90Q02509 493 aaPredicted RBP11.89□□□□□ -0.51
CLCN3-210ENST00000515420 TBL3Q12788 808 aaKnown RBP11.89□□□□□ -0.51
CLCN3-210ENST00000515420 ASPHQ12797 758 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 UBAP2LQ14157 1087 aaKnown RBP11.89□□□□□ -0.51
CLCN3-210ENST00000515420 ELOAQ14241 798 aaKnown RBP11.89□□□□□ -0.51
CLCN3-210ENST00000515420 SPIN4Q56A73 249 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 SGO1Q5FBB7 561 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 CCNYL2Q5T2Q4 361 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 NDUFAF5Q5TEU4 345 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 LIPMQ5VYY2 423 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 C4orf33Q8N1A6 199 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 CCNYL1Q8N7R7 359 aa11.89□□□□□ -0.51
CLCN3-210ENST00000515420 BANPQ8N9N5 519 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms