RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 BOLA1Q9Y3E2 137 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 CFAP47Q6ZTR5 3102 aa7.85□□□□□ -1.15
CCL28-204ENST00000514421 ATP6AP2A0A1C7CYW4 349 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ARGFXA6NJG6 315 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 IDSB3KWA1 339 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 AIM2O14862 343 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 PCDH17O14917 1159 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ANKRD28O15084 1053 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ERI3O43414 337 aaKnown RBP7.84□□□□□ -1.15
CCL28-204ENST00000514421 DNAJB6O75190 326 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 RDH16O75452 317 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ATP6AP2O75787 350 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 B3GALT4O96024 378 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TGFB1P01137 390 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CYC1P08574 325 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 LINC00032P0C843 101 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 PCNAP12004 261 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ZNF10P21506 573 aaPredicted RBP7.84□□□□□ -1.15
CCL28-204ENST00000514421 ARL1P40616 181 aaPredicted RBP7.84□□□□□ -1.15
CCL28-204ENST00000514421 XCR1P46094 333 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CCL11P51671 97 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 FOXL2P58012 376 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 STX1BP61266 288 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 PHEXP78562 749 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ATP1A4Q13733 1029 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CCNIQ14094 377 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 RBBP7Q16576 425 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CPSF6Q16630 551 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCL28-204ENST00000514421 AP5B1Q2VPB7 878 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TMEM35AQ53FP2 167 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 AGKQ53H12 422 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 C10orf62Q5T681 223 aaPredicted RBP7.84□□□□□ -1.15
CCL28-204ENST00000514421 TRIM40Q6P9F5 258 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ABHD17CQ6PCB6 329 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 PCSK4Q6UW60 755 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 BNC2Q6ZN30 1099 aaPredicted RBP7.84□□□□□ -1.15
CCL28-204ENST00000514421 PPP1R32Q7Z5V6 425 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 MRGPREQ86SM8 312 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TMEM151BQ8IW70 566 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ZC3H7AQ8IWR0 971 aaKnown RBP7.84□□□□□ -1.15
CCL28-204ENST00000514421 DDIASQ8IXT1 998 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 EXD3Q8N9H8 876 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 PLPP5Q8NEB5 264 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 OR2L5Q8NG80 312 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 HUS1BQ8NHY5 278 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 METTL6Q8TCB7 284 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 METTL21AQ8WXB1 218 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TBC1D20Q96BZ9 403 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TUBGCP3Q96CW5 907 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CLPTM1LQ96KA5 538 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 MARK4Q96L34 752 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 OR1F2PQ96R84 312 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 F2RL3Q96RI0 385 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TBCDQ9BTW9 1192 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CRB3Q9BUF7 120 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ROGDIQ9GZN7 287 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 AICDAQ9GZX7 198 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ING2Q9H160 280 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ADNPQ9H2P0 1102 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 WDR41Q9HAD4 459 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 PRDM7Q9NQW5 492 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 NOP53Q9NZM5 478 aaKnown RBP7.84□□□□□ -1.15
CCL28-204ENST00000514421 HCN3Q9P1Z3 774 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TMEM181Q9P2C4 612 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 ABCD2Q9UBJ2 740 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 CD300AQ9UGN4 299 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 MKL2Q9ULH7 1088 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 NDUFAF1Q9Y375 327 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 FIS1Q9Y3D6 152 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 LRRC42Q9Y546 428 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TIMM22Q9Y584 194 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 PTGDR2Q9Y5Y4 395 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 HS3ST3B1Q9Y662 390 aa7.84□□□□□ -1.15
CCL28-204ENST00000514421 TLN1Q9Y490 2541 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 A0A1W2PP18 115 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 ZNF860A6NHJ4 632 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 EIF4E1BA6NMX2 242 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 SLC28A1O00337 649 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 FOXE1O00358 373 aaPredicted RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 SOCS6O14544 535 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 ACOT8O14734 319 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 FFAR3O14843 346 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 GPR42O15529 346 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 B3GALT2O43825 422 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 ALOX12BO75342 701 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 EEDO75530 441 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 CRCPO75575 148 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 FHP07954 510 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 FAM87AP0C7U9 286 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 RNH1P13489 461 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 JAK1P23458 1154 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 NEK2P51955 445 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 ARFIP1P53367 373 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 PLA2G16P53816 162 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 POLE2P56282 527 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 SOX8P57073 446 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 SLC34A1Q06495 639 aa7.83□□□□□ -1.16
CCL28-204ENST00000514421 TRAP1Q12931 704 aaKnown RBP7.83□□□□□ -1.16
CCL28-204ENST00000514421 MAD2L1Q13257 205 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms