RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ACVR2AP27037 513 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 CD70P32970 193 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 CBSP35520 551 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 DCDC1P59894 354 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 DEFB115Q30KQ5 88 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 METTL2BQ6P1Q9 378 aaKnown RBP9.21□□□□□ -0.94
VCAN-210ENST00000513960 Q6ZNB5 142 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 ADAMTS19Q8TE59 1207 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 FBLIM1Q8WUP2 373 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 GATAD2BQ8WXI9 593 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 RIT1Q92963 219 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 NELL2Q99435 816 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 SLC29A3Q9BZD2 475 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 SPG21Q9NZD8 308 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 EIF3KQ9UBQ5 218 aaKnown RBP9.21□□□□□ -0.94
VCAN-210ENST00000513960 TRBC2A0A5B9 178 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 PDPK1O15530 556 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 FABP7O15540 132 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 SSNA1O43805 119 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 LRG1P02750 347 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 PDGFAP04085 211 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 HOXB6P17509 224 aaKnown RBP9.21□□□□□ -0.94
VCAN-210ENST00000513960 DDCP20711 480 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 MAGEA2P43356 314 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 HYAL2Q12891 473 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 CRTC1Q6UUV9 634 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 TRIM46Q7Z4K8 759 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 PDZD3Q86UT5 571 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 CALHM3Q86XJ0 350 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 C1orf52Q8N6N3 182 aaKnown RBP9.21□□□□□ -0.94
VCAN-210ENST00000513960 DENND6BQ8NEG7 585 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 AP3S1Q92572 193 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 NACC2Q96BF6 587 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 TMEM80Q96HE8 168 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 OPALINQ96PE5 141 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 C19orf43Q9BQ61 176 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 ZDHHC6Q9H6R6 413 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 KLHL1Q9NR64 748 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 RDH8Q9NYR8 311 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 CCL27Q9Y4X3 112 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 V9GYH0 126 aa9.21□□□□□ -0.94
VCAN-210ENST00000513960 CSO75390 466 aaKnown RBP9.2□□□□□ -0.94
VCAN-210ENST00000513960 EFEMP2O95967 443 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 CXCL10P02778 98 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 TP53P04637 393 aaPredicted RBP9.2□□□□□ -0.94
VCAN-210ENST00000513960 ZNF250P15622 560 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 MLLT3P42568 568 aaPredicted RBP9.2□□□□□ -0.94
VCAN-210ENST00000513960 STK19P49842 368 aaPredicted RBP9.2□□□□□ -0.94
VCAN-210ENST00000513960 CRISP1P54107 249 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 GCNT6Q5T4J0 391 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 OR2G6Q5TZ20 316 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 FRG2Q64ET8 278 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 XKRXQ6PP77 449 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 SERPINA11Q86U17 422 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 SLC39A11Q8N1S5 342 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 UBTD2Q8WUN7 234 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 SCRN2Q96FV2 425 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 MAGEB10Q96LZ2 347 aaPredicted RBP9.2□□□□□ -0.94
VCAN-210ENST00000513960 QRFPRQ96P65 431 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 DEFB118Q96PH6 123 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 FRG2BQ96QU4 278 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 EPYCQ99645 322 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 PITX2Q99697 317 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 CHIAQ9BZP6 476 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 SUV39H2Q9H5I1 410 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 C3orf14Q9HBI5 128 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 DIABLOQ9NR28 239 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 CLEC4EQ9ULY5 219 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 MYO10Q9HD67 2058 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 H3BUI4 141 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 CDK2AP1O14519 115 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 SLC30A4O14863 429 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 PBLDP30039 288 aaPredicted RBP9.2□□□□□ -0.94
VCAN-210ENST00000513960 SMSP52788 366 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 SRSF11Q05519 484 aaKnown RBP9.2□□□□□ -0.94
VCAN-210ENST00000513960 TARDBPQ13148 414 aaKnown RBP eCLIP9.2□□□□□ -0.94
VCAN-210ENST00000513960 FAHD1Q6P587 224 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 PTOV1Q86YD1 416 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 TMC8Q8IU68 726 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 DNAJB8Q8NHS0 232 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 FIBINQ8TAL6 211 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 CSGALNACT1Q8TDX6 532 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 MND1Q9BWT6 205 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 NDUFAF4Q9P032 175 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 SLC25A13Q9UJS0 675 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 CLCA2Q9UQC9 943 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 NCKAP1Q9Y2A7 1128 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 HTTP42858 3142 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 ATP6V1G2-DDX39BF2Z307 99 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 GREM1O60565 184 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 IFNW1P05000 195 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 CHMP24386 653 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 TALDO1P37837 337 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 ALDH9A1P49189 494 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 XKP51811 444 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 ABRQ12979 859 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 MICAQ29983 383 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 IDNKQ5T6J7 187 aa9.2□□□□□ -0.94
VCAN-210ENST00000513960 TNFAIP8L2Q6P589 184 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms